Gene detail

Detailed information of BRAKERXEIP00000039680.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: XP_028401526.1, integrator complex subunit 10-like [Dendronephthya gigantea]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000039680

ATGGAGGTTGATGGTGTTGATGGTGTGGAAGATTGTGAAGATTGGCTTGTTCAGAAAACCCACAATGCTGTGAATGAAAAGGATTTATACGAAGCTAAATGTTGGCTTTTCACTGCAAAATGTTTGTACCCGTTGAACTTCAAAGTGCAGTATGAAGCTTACTCAATTGAAAAAGATGCAAGGAAAGTCAAAGAAGCTGCAGAGCTTTTTCTCGACATGTTGGCACGATTCTCGACGGAAAAGATTCTTGCTGAAGAATTGTGCAAGATCACAGAAGCACTCGAAGCAAAAGATGTTGATCaaaaaagtatatttttaaaAGATATGTTCAACAGTTTATCTCGGACGTCGCAGAAAGGAATTTTAATTAATGCTGCAGCGAAACAAAGCGACTGTTCTGAGAAATGTCGGCTTACACTGCTGTTGATAAAACAATTTCCAGAAGCTGTTAAAGAATGTGCTGTTTCATTAATACAATCATTAATGTCGAAAGAACTCGAGAGCTATCCAGATTCTCCAATCAACATTTATAGAAAGTTGTTAGTTTGTAATGTTCTTCCTGTCGTTGTAAGCAGTGAACAGTTGGTGATTAATATAGAAAACAAGCCTGACAAGAATCAGAATTCAAACATTCTGACGCTGAGCCCAGATCAAGTGCTTAGTTGGCTAGAGTTATCAATTCAATACATCGTTTGCTGCCAGGCGTTTCAAGCTCATGTCTACACGAATTTCTCGTATGAGGTAGATCCTTCCGTCCATAACCACGCTGATTTGTGGTCGCATCTTCACGATCTCCTGTGCATCATGGGTAATAAATGTGGTTGGGTGGATATTTTGCGTTTGAGAGACATCTTATCGCCCAACAGGAGTGTAAAAGATGCATGGAGTTGCTTGTCAGATATTCATCATAATCTTAAGAAATCAATGAAAGTCACGACTAAAGCTGTTGAAGAAGGCCAAGCATCGCCGACTGCACTCAATATTTTAGCAATGGAAAAAATAGGTGTATTTTATGCCGCTGTTACAATTTTCTTTCGAGCTGTGTGGCAATACTGCAAGATCGTTAACAGAACAGATGAGCAAGGTATAACAGATACGAATACAACTTCGCCTCTTATTGTGCTGTTAGAAGATTTGTCTAACACAGGGAAGTCCACTGAAGCGACAGAAGTCAGgcACCCGcccaaaaagaagaaaaaacctGTAGATgaAAAGCAACAAGTTCATTTAAGCGTCGGATGTAACTGTGTTTCTGTGGAACCCGGTGTGTGTGATTATTTCCTCGTGGCTGCGGATACTTGGCATATGCTTCATTCGCATTCAGATTATAAGAACGaatTTTCTCGACTCCTGGACTCGTGGAAAGTGGACGACTGGCAATGGATATTACCATTTCAAGTTGACAGACATATCTACCGAGGAAAATTCAAAAAGGCCGTTGAAATACTACAAGATAAAAAGGAAAGTATTAGGCATTCATCGTCCAATCAATCGTTTTCGCTAAGGTGTTCTTTGCAACTGTCTTCTGTGTTGTCCTGTCTTGGTGAACATAAGAAAGCATGCAATGTTATTCTGGAAGCACTCGAGACATTCTGGGAAGGTTCTGATAATCTCGATGATTATAAAGACAAACAGAAGAGAACATTCATTGACTGTAGTTCCACAAAGAGCAACAAAACTCATTCTCCTAATGATCGTCAGCTTGAGCTTGTCGAATGTACGGAAGATGAAGCCCTATCATATTGTGTTCAGCTGCTGGTCAATTCCCTAAAGTCACGTGTGTTTTCTGAAAGATGTAACGACAAGCTGCTTGGTCATCTTATTGTTTTGTTGCAATATGACTGGCCTAAACGAGAAGAAGTATTTTTTGATGCGATCAAGAAAATACAGGCTCAACAAGTATTTAAATATCCGTGCTTTTTTGATTATATTATCTTAATTGACATCCTCGAGGAGTTTGCATACTTGTATAAAGATGAAAGTATACAAATTGAATTGCTTCGTAAATCATCATCGTCGAACTCAAGAAGTCGTACTCTTACCAGAGGTTCAAATAAAGGAGCGAAAGAAGATTTGAAGTCTTCACTAGAGAAACAAGTTGCCAGAGCAAGTGAAAGTATAGAGTCAATTTTACGCTTGTTTTTTATCGAGGAGAAAAATAGTCTTGTTTAA

Transcript

BRAKERXEIT00000039680

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K2A7	Integrator complex subunit 10 OS=Mus musculus OX=10090 GN=Ints10 PE=1 SV=3
Q6TNU3	Integrator complex subunit 10 OS=Danio rerio OX=7955 GN=ints10 PE=2 SV=1
Q5ZLS8	Integrator complex subunit 10 OS=Gallus gallus OX=9031 GN=INTS10 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004113 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21045 all species →	INT10	Integrator subunit 10	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026164 all species →	Family	Integrator complex subunit 10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16055 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016180 all species →	Biological Process	snRNA processing	Interproscan
GO:0032039 all species →	Cellular Component	integrator complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13147	INTS10; integrator complex subunit 10	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.