Gene detail

Detailed information of BRAKERXEIP00000039764.1 in Muricea muricata

Genomic Location: chr3:8018039...8033287
NR annotation: XP_028401703.1, unconventional myosin-VIIa-like [Dendronephthya gigantea]
Species Muricea muricata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

BRAKERXEIT00000039764

ATGGGAGCTGGGAGTCTTTTTAGTTTGGAAAATGGGATTCCATGCACAGAGATTAGGAACATCGTTCAAAAAACGACGGATAATATAGGGATCGGATTAAGGAGAAAGGATGTATTCCTACTGTACACTACCAAGAGGGGCAACTTTGGCTTCTTTTCAGAACATGCTACAGCTCTACGAGATATTCTTCTGTATATTTGGAATGGGCTTAAAAAACGTTCCAGATACTGCGTTGCTTTGCACGATTATCATCTAGCTCATCGCTCACACTTGGCATTCCGCCGTGGTGATATAATTATTATGGATGAAAACTGTAGTGGTGAAACACTAAATACTACTGGATGGGCATCTGGAACAAACGATCGCACCAAGCAATGGGGAAACTTTGCTGCTAATTATGTTTACATTGTTCCTGTAGTTTACGTTCAAACTTCTCCTAAACCTGTTGCAAATAAACCTGAGACACGCCTATTTAGACCACCTTCTCCAGAAGAGCCAACAACAAGCAACAGAGCTGAGATCGATGATCTTATGAAAGCTTTAGAAGCTAAAGATGTGAAACTGCGTTCAGTTGAGGGAAAAGTTTTTGAGCTTGAAAGCGAACTAAATCAGCTCGGTCGAGAGAAGCAGCAAAGTGAGCTGGTCTTGAGAAACGAAAAAGAAACTTTCGAATCAACGTTGGAGAGAAAGGAAACTATTCTTGTAAACACCAGAAATGAGCTCGAAGATCTACGACAGTACAATAATCAAGCATCTTCAAAACTGGCCAACATGCAGAAAAATCTTCGAGATCAAGAAGTGGAGCTGGAAACGTTACGAAACGAACGTTACGCGCAGCTGACAGAAATTAAAGATAAAGAAAGTGCTCTTTTCACTAACAGAGCTCGTCTTGTCGAGTTGGAGCGTCAGTATACAACAGCAAATGAAGAAGTGGAAGACCTTCGATCCAGAGTTCAAACCAAAGAAGAAGAGCTAACTCAAGTTAAGAGAGAGCAGCATCAAAATATTCTTCTTATTACTGAAATGGAAGGTTCCTTGAACGGGACTCGCAGGGAATTGGAAACATTTGAAAGGCAGCAATCTGAAGCAGCGGCTACGATGAAAGACATGCGAAAAACCATTGATACCCAGGAAAGCTCCATTACAACATTAAGAAGTGAAAGAGATGCCCATTTCAGCGAGCTTCAGAACAAGGAAATGCTTTTATCTAATACACGTAGCGAGCTCATGCGCTTGAAAGAAGAAAACAATGATGCAAGTATCACAATTCGACAACTCAAGGAGAAAACACGTGATCAAGAAGAAGAGCTGCACATGCTAAGATTGCAACGGACTGAGCAGAATAGCGTTACTACGGCTCAAATTCAAGAAATGGAGCGCTCGATTGACGAAAAGAATGTCAAGATTTCATATTTGATGGAGGAACGAGATAGAAATATTGAGAAACACCGAGATGAGATTCGCGACCTGGAAAAACGGTTATCTGAGCTGAGCAAACGGAAAATTGTTGAAGTATCTAAGCCAGTTTTGAGACAAGACATCCGTATTACTACTACCCCAGTAGCGGCTGAACCTCCGAAAAGCAGGATCCACACGCTGGAAGTGTATGCAAGGGACTGTTTCACTGATAATATGACATGGGTCCATCAGAGAGATCCAATTTCTCAGCCACTTCACAAGATTTTGCTCAGAAATCAAGATAAGAGAGACAAAGCAACTGAAATCTTCAAGTTGATTCTAATCTACTCTGAAGAATTACCTGGGAAAAGCACCATGTCAAAGATTCAATTGACGGATGAAATATTTGGTCCTGCGTTAGATGATGAAGTAATACGAGATGAAATATATTGCCACTTAATCAAGCAGTTAACATTTAACTCTAACTGGGAAAGTGAGAAGAAATGCTGGGAACTGATGTGGTTGTGTACTGGCTTATTCGCGCCACCAAGCTTGGCCCTCACAAGACATGTAgaactatttttaaaatcaagcgGAAAACCACGGAGTACCGAGTGCTATTCTAGAATGGAGAGAGTTGCTCAGTTGGGGGCAAGAAGAGCACCTCCACATTACATGGAGACAGATGCAGTTACCCGTGAAAATTGTGTCATGTTCCACAAGTTCCTCTTGCCTGACGAAAGTGAAGTGACTGTTGAAGTCGATTCGttatcaaagccgtctagtatTCTTCAAAATATAGCACGTAAGCTGAGCTTAAAAACCTCAGAAggatttggaatttttgttcGTGTTAACCAGCAAGTTTTAGGGATGGCCGACACAGAGTATTTGTTTGACTTCCTTTGGTTATTGGCATCATTAGGTACACCCGATTCACCTAATGGAATAGACTATGAACTATATGTGACGAAGAAGGTTTGGTCGAAAACAGTTGGTGGGGATGATGTCATTGCTGACCGAATATTTCATTACCATCAGGAGTTACCTCGGTATCTTCTGGGTTATCATAAATGTTCACTTAATGAAGCGGTTGAAGTTTCTGGGCTTGCATACAGAGTTTACCATGGGGAAGACGCTCGTCCATCTGATGATTTTCCAGATCTTCTGGATGAAATTGTTCCGAAGACTTTCAGATCTAGCATGTCTGACAGTCAGTGGGTGCAGAGTATCATGGCCGAACATCGAAAAAATCCAGGCATGACCAAAAATGAAGCTAAAGTTGCATTTTTGAAGAAAATGCAATTGTGGCCAACATTCGGCTCTGTATTCTTTGAAGCCCAGCAAGAGATCAGTCAAGAGTTCCCTCCAATAATCTTCGTTGCCATTAACAAATATGGAATTAATGTAATCAACCGAGACACAAGAGAGTTGTTGAAAAATTATACTTATGGGTTAATTTCACATTGGCGAAGTGGAGACGAGACGTTTGAAGTAATTATTGGTGGTACCCATGATGGAAAAAGAATTGTTTTCAAGACACATTTGGATTATGAGATGGATGACTTGTTGACCTCATACGTTGCATTCTATTCGGATGAAAGAGAAGCGGAACAGTTGAATGCGTTGTGGTCTCAAACAGTCAGAGAGATTCTTcgcaaacaaattgctattccTCAGGAAAATGGCATGTCACATGTTAACAACCACTAA

Transcript

BRAKERXEIT00000039764

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9V3Z6	Myosin-VIIa OS=Drosophila melanogaster OX=7227 GN=ck PE=1 SV=1
Q29P71	Myosin-VIIa OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=ck PE=3 SV=1
Q13402	Unconventional myosin-VIIa OS=Homo sapiens OX=9606 GN=MYO7A PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000863 (this species only) · gene tree & orthology
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00373 all species →	FERM_M	FERM central domain	Domain	Interproscan
PF00784 all species →	MyTH4	MyTH4 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019748 all species →	Domain	FERM central domain	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR000299 all species →	Domain	FERM domain	Interproscan
IPR038185 all species →	Homologous_superfamily	MyTH4 domain superfamily	Interproscan
IPR035963 all species →	Homologous_superfamily	FERM superfamily, second domain	Interproscan
IPR000857 all species →	Domain	MyTH4 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR051567 all species →	Family	Unconventional Myosin ATPase	Interproscan
IPR019749 all species →	Domain	Band 4.1 domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR014352 all species →	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22692 all species →	MYOSIN VII, XV	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000039764.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.