Gene detail

Detailed information of BRAKERXEIP00000041445.1 in Muricea muricata

Genomic Location: :...
NR annotation: XP_028401262.1, uncharacterized protein LOC114524400 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERXEIT00000041445

ATGAATACATCGCCAAATAAACGAAAACGACGGCGGAAAACAGAGAGTTTTGAAAATTCTGAGATGGCACAATCCTCGAGTGTTAATCATGAAAATGCTGACTGTACGGGTAATAAGTGGAAGCGGAGACTTCATTCTTTAAGAAGAAGCTTATCGAAGAAAAAAGTGACAAATCTAAATGGATTTAGAGCAGATGAAGAGCAGGATGAAGTATCTTTCGAAAGTAAGAACAAAGAACCTGTCATTGCGGATATTACATTTGATAATAGATGCAAAGAAAATATTGTGTTAAATGGTTGGCAACAAAATTGTAATGAAAAGGAATCGCCGTTATTGAACGATTATTCCTCCAGCAATAGTCCTAATTTAGACTTTCCCATATCATCTGATGACAAGacgaagaaaagaaaaggtttTCATCGACGTGCTAAAGGTGACACAATGCGAGGCAACAAATATGATCATAGCACGTCAAAACAAGATTTACAAAGTGGTAAAAATAAATCATTAAATGGCCTCGAGGAAAAAGATAGTGGTGTAAAGAGAAGCAAGGGTCGTGTAAGTGGTCGTAAAAATAAACGTTTATCATTATTTTCAAGCTGGTTTAAATTACCAAGCCGGGCCTCTTCTGAAAAGAACTTAAAACGCCGAGGAAGACGTTTATCAGTATCAACCGGGAATTTTAATGAGCAAAGTAATTTCAAATTGCTCACGGATGTGAAGCTTTTAAGAGACCCCGGTTATGTATCGAGCTCTGGGGATTCTCTTGATTTAGACGAAGAAAGATATCAGTCTTTGAGGCGTTCTCGGGCGTCTTTAATCGATATTAAATGGCATAAACATGCAAAGAGCGAAGGCAATCTCGCCAACCCAGTATCACGCAACCGTACCTGTAGTTTAAGTCCTTTATCATCGGCAATTTCGAAAAGGAAACAAATTCCACGTTCATGTGAAAATAGTCCAAATCTCCAGAGAGATGACATAAGTACACCGCGTACACCGCGTACCGTACAGAACCGGGATATAATTGCTACCCCAAATGAAAAGTGCGCATCGAATGCGAACAAAACCTGGGAGGGCTGGCGCCAAGTTTCAAAAGAGGTATCTCAGTGTGATAACAGTTTAGGCAGCTTTGAAAATATTACCGAAGATGATGACGTTTATTTAACTGCAGAAGAGGGCTCCTCGCGCAGCTCACCTAACCTATACTTAGACACGAATGACAAACCAATGCATGATTGTAATAAAGAAACTCGACCCAAACCACAAAAGTTAGAAAATCAGAAAAAATTGGAGGATGTGCCTGGTACATCAACAAatgagaaaaacatttcttctcCAAGTTTAACTATTTCTGACATAAACGGAAATAGACAAGAGTTAGCCCATGCAAGCGAACTAAGTGGCGGTGTGACAACACCAAATTCTAACTCACTGCATAACAACGAAATTTTGCACGTCCAACCAGCAAAGCATTTTGACAAGAAGACATTTGAAAATGCCAAAAACAACATCCCAGCTAAGACAATGACATATGTATGTAAAAGCTGTCAGTTACAGGCAAATGGGAGAAAAACTATTAAACCTAAAGATTTTCGTAAACTGTCCTTGGGTCAACTCACTGATTTTAATGAAAGACCTGTAGTAGCGATACGATGCATGCAATGCAAATCTTCCAGAATATCAAAACAAAGTGACACTTGTCATGACGTACTTATTACCAGACCACCCAAAAAGCCAGCTCCAAAACCTCCAGCCTTGATGAAAAATAAGTCTAAAAGTCTAACTGCACTTTCAGGAAAATTTCCAGTTTTATCTGAACAGCTTGATCTGAATGAGACCTCGTCTTTATACAAATTGAATGACTCTTGTAGTGATAATTTATGTGAACTGTTGTCACAGTCAAAAGATGCATCTTCACCAACCAGTGAGGGGGTTTATGTCGGAGTTATGGGGGATCAAGGTGTTATCCTTCGAAAACGTAGGATGTATCCCAAACAAAAACGTGTGGTGTCTATGCCTTCAGATTTACTCGAGAATGTCATGGAGGTTGAAGGAACTGAGGGACAGTCTAGTACTAAAGACAGGACATCTAGGATAAGAGATGGAAAAACACAGCCATTACAAAGTTCTGGGAGTGAGGTGTATTTAAGTTGTAATTCCAATGCCCCTTCAAGTTACAATTCTAATGCAGGTGTATTAAATAGTAGTGTTGAGAAAGAATTATGTTCAAGGTCAGTTAGCATATCAAGCATTGATGTCCAAGATGTGAGCATGAAAAAGAAAATCCATTCTCAAAGTGTCCCATGTTTGGCATTCAATAAAGATTGTCTCAATGGTCTGAAATCAACACAAACTAACAATGGTGTACTAGAAGAAAAAATCTTTTCCAGCCAAGCTTTTTCTGTTGCTAATGATTGTATCAGTCAGCAATCATCAACAGCACAAAGCATGATGTCTTTGAATTTCCAACAATCTCAGGAAGGCAGTGATGAGACATCTGATAAGatGGCAGGCAAACCTTTAATGTATGCTGAGGCATTGTGGGACCATGTTACGATGAATGAGGAAGAGTTGTGTTTCACAGCTGGTCAGGCTATTGCAGTGTATGATGTTGATGATCCTGAATGGTGGTTTGGTCTGGCTGATGATCACATTGGATGGTTCCCAGCTTCATTTGTCAGGATCCCAGTTTCTGGAGATTTACTGAATAAGTATCACAATAgttatggaaaaaaattgaagaatTCAGATGGGAGCAGTGAAAGTGGAAGCAATGTATGTTTGTCAAAGGAAGAAATCCGTGCAAAGATTGTGGACGAAATCGTCACTACAGAACGAGATTATGTTCAAAACCTTGAGGACATTGTGGAGGGATACCTGAAACAAGCTAAGAAAAGACCAGACATGTTTAATGATAAACTGCTGGCAATAATCTTTTCAAACATTGAAAAAATCTATCAATTTCACCTGGATTTCTTACGTTGCATTGAGCGTCAGTATAATCAAGCATGGTCGGATGTCTCTTCCAGTGGGGAAATTGGTGCAGTCTTTGTACAAAACAAAGAAAATTTCGAGTTGTATGCTGAATATTGCAACAACCATCCACGAGCTTCCTCTGAACTGAAACAACTACTACAGCAAGACAAGTATCGATATTTCTTTGAAGCATGTCGAATGTTGCAAGATATGATCAAGATTTCTTTGGACGGCTTTCTTCTCACGCCTGttcagaaaatttgcaaatATCCTTTACAACTCCAGgaaCTTCTAAAGTACACAAATTCCGAACACATTGATTataaaaatgtagaaaatgcGTTAGAAGCCATGCGTGAAGTGGCTTCTAGCATCAATGAGAAGAAGAGAAAAGTGGAAAACATTAAAAAGATCGCTGAATGGCAGCTGGGGATTGAACAGTGGGAGGGTGAAGATGTCTTGATCAAGAGTAGTCAACTAGTCCATTCTGGGGAAGTTTTAAAGTTGTACAAAGGAAAAGCGCAAGATGTCACGTTGTTTCTGTTTGATCATCAACTTGTTTATTGTAGAAAgGATTTAATAAAGAagtgttcattggaatataaaGGACGAATTGTATTGGAAAATTACAAGTTTGAAAAACTTGAGGATGGAGAAGTGTCTCAAAATGGTGTAGCAGTGACAAATGCATGGAGATTATCAAGCAAACAGAGCAATACAAGTTGTATTTTTCAAGCTAAGTCATCAGAGCAAAGAGATAAGTGGATAGGATACTTTCTTCAAGAAAGGAAAATTGTGTACGAAACGACTTCAGCTAACAGCATCCCAATCGAAGAACGTCTGGCAGCGATGGATGAAGCAAAAAACTCTGTAAAGAGCAGAAAACAGATCATTAAAGGTGAAAAAAAGTACGGCAACTTTAATACTGTGAGCCGAGCAATAGGACAACTGCATTATGGAAGTGAAAGCCACCGTCCTAAGATTGATCTACCTCCACCGGTGTCAAGCGCCATGTTGTTTGAAAGAGATCAAGTGAGATCATCTTTTCTAAGAAACTCTGGCGTGTTCAAGAAACGACGACCCAAACCAAGGCATCGATCTCAGCCTAGATGA

Transcript

BRAKERXEIT00000041445

Protein

Uniprot

Gene family

Uniprot term	Description
Q3UTH8	Rho guanine nucleotide exchange factor 9 OS=Mus musculus OX=10090 GN=Arhgef9 PE=1 SV=1
Q58DL7	Rho guanine nucleotide exchange factor 9 OS=Bos taurus OX=9913 GN=ARHGEF9 PE=2 SV=1
O43307	Rho guanine nucleotide exchange factor 9 OS=Homo sapiens OX=9606 GN=ARHGEF9 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07653	SH3_2	Variant SH3 domain	Domain	Interproscan
PF00169	PH	PH domain	Domain	Interproscan
PF00621	RhoGEF	RhoGEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001331	Conserved_site	Guanine-nucleotide dissociation stimulator, CDC24, conserved site	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR035899	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR000219	Domain	Dbl homology (DH) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47544	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05769	ARHGEF4_29, ASEF1_2; Rho guanine nucleotide exchange factor 4/29	-	Membrane trafficking	ko04131	deepkoala