Gene detail

Detailed information of BRAKERXEIP00000041865.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB3977856.1, ubiquitin-like-conjugating enzyme ATG3 [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CPX6	Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus OX=10090 GN=Atg3 PE=1 SV=1
Q6PFS7	Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio OX=7955 GN=atg3 PE=2 SV=1
Q0VCL3	Ubiquitin-like-conjugating enzyme ATG3 OS=Bos taurus OX=9913 GN=ATG3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006563 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03987 all species →	Autophagy_act_C	Autophagocytosis associated protein, active-site domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007135 all species →	Family	Ubiquitin-like-conjugating enzyme Atg3/Atg10	Interproscan
IPR046962 all species →	Family	Autophagy-related protein 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12866 all species →	UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019787 all species →	Molecular Function	ubiquitin-like protein transferase activity	Interproscan
GO:0000045 all species →	Biological Process	autophagosome assembly	Interproscan
GO:0000407 all species →	Cellular Component	phagophore assembly site	Interproscan
GO:0000422 all species →	Biological Process	autophagy of mitochondrion	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019776 all species →	Molecular Function	Atg8-family ligase activity	Interproscan
GO:0044804 all species →	Biological Process	nucleophagy	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000041865.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.