Detailed information of BRAKERXEIP00000042341.1 in Muricea muricata

Genomic Location: chr3:51640515...51645471
NR annotation: CAB4000503.1, histone deacetylase complex subunit SAP30L-like [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q17Q39Histone deacetylase complex subunit SAP30 homolog OS=Aedes aegypti OX=7159 GN=AAEL000149 PE=3 SV=1
O75446Histone deacetylase complex subunit SAP30 OS=Homo sapiens OX=9606 GN=SAP30 PE=1 SV=1
O88574Histone deacetylase complex subunit SAP30 OS=Mus musculus OX=10090 GN=Sap30 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007807 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13867
all species →		SAP30_Sin3_bdgSin3 binding region of histone deacetylase complex subunit SAP30FamilyInterproscan
PF13866
all species →		zf-SAP30SAP30 zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025718
all species →		DomainHistone deacetylase complex subunit SAP30, Sin3 binding domainInterproscan
IPR024145
all species →		FamilyHistone deacetylase complex subunit SAP30/SAP30-likeInterproscan
IPR025717
all species →		DomainHistone deacetylase complex subunit SAP30 zinc-fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13286
all species →		SAP30Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000118
all species →		Cellular Componenthistone deacetylase complexInterproscan
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERXEIP00000042341.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP