Gene detail

Detailed information of BRAKERXEIP00000043791.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: XP_028405539.1, porphobilinogen deaminase-like [Dendronephthya gigantea]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KIN5	Porphobilinogen deaminase OS=Bos taurus OX=9913 GN=HMBS PE=2 SV=1
P08397	Porphobilinogen deaminase OS=Homo sapiens OX=9606 GN=HMBS PE=1 SV=2
P22907	Porphobilinogen deaminase OS=Mus musculus OX=10090 GN=Hmbs PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004112 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03900 all species →	Porphobil_deamC	Porphobilinogen deaminase, C-terminal domain	Domain	Interproscan
PF01379 all species →	Porphobil_deam	Porphobilinogen deaminase, dipyromethane cofactor binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000860 all species →	Family	Porphobilinogen deaminase	Interproscan
IPR036803 all species →	Homologous_superfamily	Porphobilinogen deaminase, C-terminal domain superfamily	Interproscan
IPR022418 all species →	Domain	Porphobilinogen deaminase, C-terminal	Interproscan
IPR022417 all species →	Domain	Porphobilinogen deaminase, N-terminal	Interproscan
IPR011004 all species →	Homologous_superfamily	Trimeric LpxA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11557 all species →	PORPHOBILINOGEN DEAMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004418 all species →	Molecular Function	hydroxymethylbilane synthase activity	Interproscan
GO:0033014 all species →	Biological Process	tetrapyrrole biosynthetic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006783 all species →	Biological Process	heme biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000043791.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.