Gene detail

Detailed information of BRAKERXEIP00000047862.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB3991439.1, COP9 signalosome complex subunit 7b isoform X1 [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KI56	COP9 signalosome complex subunit 7b OS=Bos taurus OX=9913 GN=COPS7B PE=2 SV=1
Q9H9Q2	COP9 signalosome complex subunit 7b OS=Homo sapiens OX=9606 GN=COPS7B PE=1 SV=1
Q8BV13	COP9 signalosome complex subunit 7b OS=Mus musculus OX=10090 GN=Cops7b PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006644 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF18392 all species →	CSN7a_helixI	COP9 signalosome complex subunit 7a helix I domain	Domain	Interproscan
PF01399 all species →	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR041481 all species →	Domain	COP9 signalosome complex subunit 7, helix I	Interproscan
IPR000717 all species →	Domain	Proteasome component (PCI) domain	Interproscan
IPR045237 all species →	Family	Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15350 all species →	COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0008180 all species →	Cellular Component	COP9 signalosome	Interproscan
GO:0010387 all species →	Biological Process	COP9 signalosome assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000047862.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.