Gene detail

Detailed information of BRAKERXEIP00000047883.1 in Muricea muricata

Genomic Location: :...
NR annotation: XP_046850263.1, tetratricopeptide repeat protein 14-like [Xenia sp. Carnegie-2017]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERXEIT00000047883

ATGATATCTATAAGTGAGGATGAATTTCATAGATATTATTGGCCCAAATTGGAGGCTGCTATTAACttgattttgcaacaaaatCCAGGGGAATATATTCCTATATCGTATGAGGAGACCTACAGTGCTGTTTACAAGTGTGTTTGTCAACAACATTCTGAAAAGCTCTATGAGAATTTGATgatacttattaataatattctTAGCAGGATTAAAAACGAATTAGAGAATCAACCTGTCAATATGTATCTCCAGAGATTTGAGCATATCATGTCTCAATATTTGCAAAGCGTGGAGGGAATTGCAGCAATATTTAATTATATGAACCGATTTTATGTAAAGCCTAAGAAAAACTGTGAGCTCAAAGCAGAACTGTTAACATTATTTTCATCATTGATTGCAGACAATGAGAGATTGTTTGATATTCTCAACCATTGTGCAGCTCAACCACTTTCATCCAATCCAGAGGTATTAATGTCAATTGTGCGAGGACTGTACATGCTTAGACCAGaaTTTGCCGAGAAGAATGTCGACCTGTTTTCTCGGTTTATACCTAATCTTGTTGGCCATTCTAATTCACTGGATGAAGAAATTATTGAAACAGAATTATTACAACAGAATTTAAGAAATCAGGAAGGATTTCTGAGGGgagaaaatttacttaagagagATCTGGATGCAGCAGAAATCTCAGTGGAAGGAGAAAGTGAGGATATCACTTGGAGAATAGATAGGTTTGTGCAATCATTGAGTGCTCTTGGCAGGGATTTAGGAGAGGCAACAGCACAAGAACAAGGATGTGAACCTGGTAGTGATTTTGCATTCCTTGATTTAGAAAATCAAACAAGTTATGCTACACATTACTACAGACAAAAACTTCAGTCATACACAGGTAGTCATGATATGAATGAAGACCCACAATTCAGGAACAGAGTAAAGAATTTTACGACTTCAAAAGCAGACTTGCTATTTAAACTGAAAGGAAAAGATAGATTACGAAGTGGAGTTGATTACAATATAGGTGAAGCACAAGAAGctTATAGTATATTTGCTACAAAAGTTCCACCACTTGAAGATGGAATGCACTTATCCAATCTTGCACGTAGAGCTCACATTTTTGAATTATTGAATGTGGATGACATTGTCCTTGGAAAAGTTGTTGGGAAGCGTCCATTTGGCGTCTTTGTAAGAATTCTCTCTTTGGTTCATGGGCGGAATTTGGATTTTAACAATATTGATATTCAGGCATTGTGTCCAAAGTCAGAATTAGAGAAAGATCACAAGTCACGTGAACATTTAGATCCAATAGATGATTTTGATGTTGATGACATTGTCCAAGGTGTGATTTGTTCCATATCAAACGATGAAGAAAGGATTGCAATTTCTTTTCGCTCTGCAAACCTGCCATCGGAATATGGCAACATTGAACTGGGTATCATTGAAGACGTCGAAGAACACAAGTTAAGACCGAAATCGTCCGATGAAAGCTTGGATTATAACGATTACTTGAGAAGAGATCCCGGATTCTGCAATCCAACCAATGTGCAGACCTTGGTTGATGTTTTAGGAATCGACTGTAAACCTCCAAGTTCGTTACTGAGATCTTGTCAAAGATGGATAATCAGTGATAAAGATACCTTGAGGAAACAACAGTCTAAGAAATGGTCAATGGACACGACGGCCATCGGTGTGGATAGCTTCAAGAGCGGTGATCATGAGAAAGCTCTGAAATATTTCAATCATGCTTTAAACATTTATGAAGAAAATTCCGAAGCCTTGGTTGCTCGTGGCGCATTGTATGCAAACCAAAACAAATTCGAAAAGGCCATCGTTGATTTCAAGCAAGCTTTGAAACTGCATCCAAAACATCACAATGCAAGCAAGTACTTGAAAGAAACATTGTATGAGAAGGCACTAAGgttaaaaaatgttggaaacatTAGAGATGCTATAAATATATTTGAACAAGTGTTAGAGCTGGATCCTCAAAGTATTACAAGCCGGGGGCATTTGGAAGAACTGAAAGCTTTATTAGCTGCTAAGTTGGTGGAAGATGAGAGTAAAGCTCGGAAGGCTGCAAGTGTGCTGCACGAAAATCGAAAAAAGTTTGAACATGTGAGAAAACTGATCAAGTCAGATCCGGATGTCGTGAAAAGTGCTCGAAAGAAGAAAAGaaaaaagaagaaagggaagaaaagcaagaaacgtAGACGTCGTAGTGAAAGCGAGACCACAAGTACTGCTAGTGAAGGAGAAGGGAATGACAGGAAAGGTGATGAATGGATTGAAAAGGATCCTAAGGGACATTCACCGGGAACATTGAAACACAGTTTAATGGAGAGTAAAAGCAGCGCAATGACAGGAGCCACATCCAGTGATACTCGAGGGTCATTTGTAGCAAGTGAACGTAAGTTTTCTGAAACCGGGGAAGGTAGAATGGAAGATCGAAATGTGAGGGGGAAAGATTTGGAAAGGAACGTGCAAGGATTTTTAGGAAATGTTGGAGAAAGGCGAGAATGTAAAGAAGAGGAGGAGGAagtaaaatataaagaaaagaaaGGCAGGTTTGGAAATGGTGATAGGGAAACTATCAAAAATATATCTGGCAAGAGTAAGCTCCATCGTACTTCTCATTCAAGAAGTAGAAGCGGTTCAGTTGAGAGGAAAGATGGGGCTACGATGAGTAGAAACCAAGGAGATTCAGGCACACGTAAGGAAAGTTGTAAGAAGCTGAAAGAAAGCGATTCTTATGGTGGAAAACATCGGGAAAATACGAACAGACGAGAACATGGAAGGAGAAATGTACGACATAATGCAAGAAGTAGCTCAGACGACAGCAGTCGCGAACGAACTACGAGGAACTTTGAGCGTGACGAGTCGACAATTGTCAGACGTAGGAGAAGTCAGAATGGCAGAGGACGGAGGAGTACAAGTAGAGATAGTAGAGGACGACGAGGTTCGCGTGATGATAGTAGTAGTGAAAGAGATCGGTCAAGAAGTAGAAGCATTGGTCTGAAATGTGATCGATCAAGACGGAGAACAACTAATAGAAGGGGAAGACGAAGTACAAGCAGAGATAATGAAGAACGGCGTACTACAAGACGCAGGAGTACAAGTTGTAGTAGTGATAGTCGGAGAAGTAGAAGTTGGGGAATTAAAGAAAGACGAAGTATAAGCATGGATAATAAAGAAAGGCGTAGTACAAGCAAGGATAATAAAGGACGGCGTAGTACAAGCAGGAATAATAAAGAACGGCGTAGTACAAGTGAGGGCAGAAGAAGGCAGAGAAGCAAAAGCTATAATGAAAGCTGA

Transcript

BRAKERXEIT00000047883

Protein

Uniprot

Gene family

Uniprot term	Description
Q86Y37	CDK2-associated and cullin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CACUL1 PE=1 SV=1
Q8R0X2	CDK2-associated and cullin domain-containing protein 1 OS=Mus musculus OX=10090 GN=Cacul1 PE=2 SV=1
Q5XI53	CDK2-associated and cullin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Cacul1 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|Cullin

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00515	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF00888	Cullin	Cullin family	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR042652	Family	CDK2-associated and cullin domain-containing protein 1	Interproscan
IPR003029	Domain	S1 domain	Interproscan
IPR001373	Domain	Cullin, N-terminal	Interproscan
IPR016159	Homologous_superfamily	Cullin repeat-like-containing domain superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46636	CDK2-ASSOCIATED AND CULLIN DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000082	Biological Process	G1/S transition of mitotic cell cycle	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:0045860	Biological Process	positive regulation of protein kinase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan