Gene detail

Detailed information of BRAKERXEIP00000048064.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB3981898.1, hyaluronidase-1-like [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000048064

ATGACgagacgttttgaaattgttttgcATGTATTCAATGGAGTTCTAAACTTTATCCGAGATGGCAAAAGAGTATATACATTACTGACATTGTGTTACTTGATCTACGTTCAGTCTTTGGACATTGACTCGGCCGTTTGTCGTTGTACAACCAAATCAAAATTTGGCAAACCGTTTGTGGTGCTTTGGAACTCGCCTACAGAAGGATGTCACGTAAATTTTAGCGTTCATATTGAACTGGAGAAATATGGAATATTGACAAACAGTAACCAGACTTGGAATGGTGAGGTGGTTACGGTGTTCTACAATGCACAGCTAGGACTGTATCCGTATTACCGTCATGAAAATGAGAAGAGAAAGTATAATGCTGGTTTGCCTCAGTTAACGAATCTGACAGAACATCTCAAGAAAGCATCTCAGGATATCGCTGAGAAAATTCCCGAACCAAACTACAGCGGGCTTGCAGTCATTGACTGGGAGGGCTGGAGACCACTCTGGGATACAAATTTTGGGAACAGACGTTTGTACCAAACTAAATCAATCTGGTTAGTGAGGAAAGAAggaaagttaaaaaataaaaatgacatTAAAATGGAAGCAAAGAAAAGATTTGAAAATGCTGGAAAACGGATGATCATTGAGACAATTGAACTGGGGAAAAAGCTGAGACCTAGGGCATTATGGGGCTTTTATGGATTTCCATGTTGCCATGGAAATTGTTCTAAACAACACAAAAAGTGGAACGACGAAGTTCATTGGTTATATAAAAGCAGCACAGCTTTATTCCCTTCCATCTACTTAATGGATGCTATCTCAGATAACAAAAAATATGTGGCAGACAGACTCCAAGAAGCATTTAGAGTGTTCCAGATGATAAGTTCTCGATATGGCCATGAATTGCCGGTGTTTCCATATTTGAGACCGGTATATCATTATGGAGCGCGCGACTTCAAAATGTTAAACGAGGCTGATTTAGAAAATGCAATCGGTCAAACAGTGGACTTTGGCAGTGCTGGATTAATACTTTGGGGGAATCATTATGACGAGGACACGTCAAGAGAGGTTTGCCTCAGGTATAACGGCTATGTTAATAACAAACTTGGTCCCTACATCTCACTTCTTACAGAGGAACTGGAGGCGTGTAGCAGAAAGAAGTGTTTCAGTAATGGAAGATGTGTTGAGACGGCTGTAGCTAGCGAGGAGCTTGGCAACAAGACCTGTAGATCATTAGTTAAATATGGCACAACATTCAAATTCAACAACAGAACATCAGAAATGCAAGATCTGGAGCAGATGTCCAAGTCAAATACGACAACGAAAGACAGGAATACCAAACCGTCTCAAATGAATAATATAAATTTTGGAAAACatgaacttttgaacaaaaacaaaacatttgagCACCTTATTTCAAAAGTAAACAAAACTAAGTTAACTGAGACGGCACGACAAGAATCGGTTGACGTTTTCGCTTCAATGCTTAATGCAACTTACACAAAGTCAACAATGGAAACTAAAACGCAAAACCGAAAACTGATAGAAATGCTTGATTCAAGTgcaaataaaacaaaacaaaagagCAAAAGCGATCCGGATTGGAATAAGAATGCCATATTGGGTTACAATAAGAAGCACGAAGTTGATTATTTATCGTTAAAAAAAGTAAATGGACCGTTGAATGAAAAATCTCTGGGGAATGCAAGTGAAAGTAAATTACAGGAACTTTTAGATGGAAATATAAGCGATAGTTCTGAGTCAGTGAACGAAATTGGAGCAAAAAGATCAGAAACAGAAGTCAACGCAACAAGCTCggacaaaacatcaaaacaaaaacaGACCCCAAAACGTGGATACTCCGCAAGGGTTGGAGAAGAAACTGCCGTACGTGTGCCGGGCGTATACATCATCTTAATAACCGTGACCCTGGGCGGAGCGTTACTAATGACAATCATATACGTCGCTATATACTATACTGTCAATGTTCGAGGAAGGTCACGCGACAACCCTTATGATTACCAATACGAGTCTGCCGACGAAAATCCATTCTCTGTAGACCCGCACAGTCCGTGGTGGAATGACGATGTCGACCCAGCTGAGAAATTGCTGAAAAATAAACGAGAAGCTAAATGA

Transcript

BRAKERXEIT00000048064

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A3QVP0	Hyaluronidase-2 OS=Bitis arietans OX=8692 PE=2 SV=1
A3QVN9	Hyaluronidase-1 OS=Bitis arietans OX=8692 PE=2 SV=1
J3S820	Hyaluronidase OS=Crotalus adamanteus OX=8729 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002185 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01630 all species →	Glyco_hydro_56	Hyaluronidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR018155 all species →	Family	Hyaluronidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11769 all species →	HYALURONIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004415 all species →	Molecular Function	hyalurononglucosaminidase activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0030214 all species →	Biological Process	hyaluronan catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01197	hya; hyaluronoglucosaminidase	EC:3.2.1.35	Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.