Gene detail

Detailed information of BRAKERXEIP00000048166.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB3987268.1, 39S ribosomal L9, mitochondrial [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q128U4	Large ribosomal subunit protein bL9 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) OX=296591 GN=rplI PE=3 SV=1
Q17XG2	Large ribosomal subunit protein bL9 OS=Helicobacter acinonychis (strain Sheeba) OX=382638 GN=rplI PE=3 SV=1
Q1CU17	Large ribosomal subunit protein bL9 OS=Helicobacter pylori (strain HPAG1) OX=357544 GN=rplI PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009593 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03948 all species →	Ribosomal_L9_C	Ribosomal protein L9, C-terminal domain	Domain	Interproscan
PF01281 all species →	Ribosomal_L9_N	Ribosomal protein L9, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020069 all species →	Domain	Large ribosomal subunit protein bL9, C-terminal	Interproscan
IPR036791 all species →	Homologous_superfamily	Large ribosomal subunit protein bL9, C-terminal domain superfamily	Interproscan
IPR036935 all species →	Homologous_superfamily	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Interproscan
IPR020070 all species →	Domain	Large ribosomal subunit protein bL9, N-terminal	Interproscan
IPR009027 all species →	Homologous_superfamily	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Interproscan
IPR000244 all species →	Family	Large ribosomal subunit protein bL9	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21368 all species →	50S RIBOSOMAL PROTEIN L9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000048166.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.