Detailed information of BRAKERXEIP00000048202.1 in Muricea muricata

Genomic Location: chr5:8176698...8178295
NR annotation: CAB4022284.1, ubiquitin carboxyl-terminal hydrolase 48-like [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q76LT8Ubiquitin carboxyl-terminal hydrolase 48 OS=Rattus norvegicus OX=10116 GN=Usp48 PE=1 SV=1
A0A0R4IB93Ubiquitin carboxyl-terminal hydrolase 48 OS=Danio rerio OX=7955 GN=usp48 PE=3 SV=1
Q3V0C5Ubiquitin carboxyl-terminal hydrolase 48 OS=Mus musculus OX=10090 GN=Usp48 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003475 (this species only) · gene tree & orthology
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240
all species →
ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029071
all species →
Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR044743
all species →
DomainUbiquitin-specific-processing protease 48, Ubl domainInterproscan
IPR000626
all species →
DomainUbiquitin-like domainInterproscan

 PANTHER
No PANTHER signature was recorded for BRAKERXEIP00000048202.1 in Muricea muricata.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0004197
all species →
Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0004843
all species →
Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →
Biological Processprotein deubiquitinationInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERXEIP00000048202.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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