Gene detail

Detailed information of BRAKERXEIP00000048700.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB3980330.1, programmed cell death 4-like [Paramuricea clavata]
Species abbreviation MMURI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98TX3	Programmed cell death protein 4 OS=Gallus gallus OX=9031 GN=PDCD4 PE=2 SV=1
Q9JID1	Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2
Q61823	Programmed cell death protein 4 OS=Mus musculus OX=10090 GN=Pdcd4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005884 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02847 all species →	MA3	MA3 domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR039778 all species →	Family	Programmed cell death protein 4	Interproscan
IPR003891 all species →	Domain	Initiation factor eIF-4 gamma, MA3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12626 all species →	PROGRAMMED CELL DEATH 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16865	PDCD4; programmed cell death protein 4	-	Proteoglycans in cancer	ko05205	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.