Genomic Location: chr5:6996860...7037329
NR annotation: CAB3976802.1, helicase with zinc finger domain 2-like [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families
| CDS |
| BRAKERXEIT00000048743 |
| Transcript |
| BRAKERXEIT00000048743 |
| Protein |
| BRAKERXEIP00000048743.1 |
| UniProt accession | Description |
|---|---|
| Q62824 | Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1 |
| O35382 | Exocyst complex component 4 OS=Mus musculus OX=10090 GN=Exoc4 PE=1 SV=2 |
| Q96A65 | Exocyst complex component 4 OS=Homo sapiens OX=9606 GN=EXOC4 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002963 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF20652 all species → | Sec8_C | Exocyst complex component Sec8 C-terminal | Repeat | Interproscan |
| PF13087 all species → | AAA_12 | AAA domain | Domain | Interproscan |
| PF00773 all species → | RNB | RNB domain | Domain | Interproscan |
| PF13086 all species → | AAA_11 | AAA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR048630 all species → | Domain | Exocyst complex component Sec8, middle helical bundle | Interproscan |
| IPR041679 all species → | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR047187 all species → | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| IPR001900 all species → | Domain | Ribonuclease II/R | Interproscan |
| IPR000571 all species → | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR041677 all species → | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR039682 all species → | Family | Exocyst complex component Sec8/EXOC4 | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14146 all species → | EXOCYST COMPLEX COMPONENT 4 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0004540 all species → | Molecular Function | RNA nuclease activity | Interproscan |
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
| GO:0004386 all species → | Molecular Function | helicase activity | Interproscan |
| GO:0000145 all species → | Cellular Component | exocyst | Interproscan |
| GO:0006887 all species → | Biological Process | exocytosis | Interproscan |
| GO:0006893 all species → | Biological Process | Golgi to plasma membrane transport | Interproscan |
| GO:0007268 all species → | Biological Process | chemical synaptic transmission | Interproscan |
| GO:0032584 all species → | Cellular Component | growth cone membrane | Interproscan |
| GO:0045202 all species → | Cellular Component | synapse | Interproscan |
| GO:0090522 all species → | Biological Process | vesicle tethering involved in exocytosis | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K25165 | HELZ2; 3'-5' exoribonuclease HELZ2 | EC:3.1.13.1 EC:5.6.2.6 | Messenger RNA biogenesis | ko03019 | deepkoala |