Gene detail

Detailed information of BRAKERXEIP00000048809.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB3980598.1, exportin-4 isoform X2 [Paramuricea clavata]
Species abbreviation MMURI · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000048809

ATGAATCCGAGACTAAAAGAACTGGAATACGCTGCACATCTTTTGTTTGCATCTCATTCTGTCACTGTTGAGCAAAGACACAGAGCTGAACAAGTTTTCCTGAATCTCAAAGCACAAAGTTCTCCATACAAGTTTTGTCAGGAAGTATTTCAGCATAGCACCAATGACTATGTTTTATACCAAGCTGTTGCAACATTGAAGGAAGCAATCATAAGAGAATGGgcaattttaaacaaatcaGATATTGATTTTTGGCAGAATTTCCTTCTAGCTTTTATCTGTGAACGGAAAAACCTACAAAAGTATGTCATTGAAAAATGTTTGCAGTGTATAGCAGTAATAATGAAAAGAGGAACACTGGAACACACAACAAGTGAAAATTCACTCCAGAATTTGACTAGAAATATCTATCAATTGTTTGCAAGCAATGATTTTAACATGAGATTAATAGGATGTTCAATGATGAGGGCATTGTTGTATGAATATTCATCTGTTGGTCAATCCAGTGATATTAAAATGAGTGTTGAATTTCATTTCAAATGCAAAGCACATTTTGAgGCTGGTAGTCTACAGCAATTCTTTGTCATGACAATACAAACTTTGCAGTCATTTAATTCTATATCACCTTCAACATTTACTAAAGAACAAATTGCTCTCCTGGCTAGCCTCCTGTCTATCACTGAAAGACTTGTGATGTGGTTTTCCCTTGACAACAATGTAACCTTACGAGCTTTTCACTGTCGGAACAATGAAACTTCAATAATAATCTTATTTAAGCCTGGACAGAGCTGGAGAGAGAACTTGCTTAATGGTAATGCTCTTGAGGTCTTCTTTAATcTTCAGTCATGTTTGAATGACAACGAAGATTTGGTTCATCGTTATTTTCTATGTCTGACGCAGTTTGCTTCATTAACTGGACAAGTGTTTCCAGACGAATCTTCATCCATCCAGTATCTTGGTCGTCTTCTACAGGGGATCTTACAGTTAGTGCAGCGTTATAGTGGTCAAGTATCGGGTACGATTGCTTGTGGTTTTGCTGCTGTCATCAATAGAATTACAACTGTATTTCCTGTTGCTTTGCTACTCAGTCTCCCAACAGAACTCGTCCAGGCATACCTTCATGCTATATCTCAGCTTACACAAAGTTTCCTGGAGATAGCAATGAGAAACGAAGATCTGCACAACGATGATACAGCCTACATGGAGGCATTCGATCAACTCTTGGTGGCGTGGGTCAACCTAGTATCCAGCTCTGGCTCTTTCCCCAAAGGTTACCTCTCAGCTCCTTGCCTGCAAATCTTGCATCTTTATACAAGGACTCACATATCAGCACCAGAAGGCACAAGGAACCCCCTGGGCCTGCAAGATCTTGATGAAATTGTGGAACTGCGAGACACTGATTTAGAAGAATTTGGTGATCAGCTTTCGTCCGTAGCAAAATTAGCACGTCATGTTCTTGTAGAAGCTGTGCCCTTTCTCAATCATTTACTTGATGTGAAGATTGCTGTTTTTATGGAACATCTGTGTGCACTTAAAGAGACAGGGCCATTAGCTGTGGATTCAATAAAGACTGAAAATCTCTACGAAGATCTACATTGGATTATCCTCCTTGCTGGATATATTCTCAGTGATGACGTGAGCGGAGAAAAATGTTTGATACCTGATGAGGTCATGATGTATTCTATTGCTGAGTCTGAGAATGTTCATTTGGAGTCTACTGTCAACTATCTAACGTCACTTGGAGAAGCTGACATAGGGAACCAAAAAATCGACTCAATTATCAGATTAGTTACGTCAATATTGAAAGTAGCTGATCTCGAAAAACAAGCGCTTGCTGCTGGATTGGCTCCTATATTGAGCCCAGAACTAGGCGGAAACATAGTCTGGGTTTTGACCAGAGTTTCTGAGGTGTATCTCATGTTGTCCGAGCCCGACTATGGCCAGGTCAGCGTACCTTTAGTGACATCATGTGGAAAGGAAAGTGAAAGCGCGCAATGGTTTGTGGGGTTCATCCTGGGCAAGGTTCTCAGTAATCTTCGTGGTTGGTTGAGTGAGGCGAGTGTCTTGGAATATACTACACACTTGCTCGTCACCTTGATGAGAAATGCTTCAAGTGCACGCTCAGCTATCTCGTGTGAAGTTATCGCTCAACTTGCCAAAGATTACGCAGAGAACAGTTCATATGTAAAAGATCTTCCCGCATTAGTACTAAGAGAGTTATCCTGTGCACTTGTTATTGCTGGATCAGCCATTGAGCATGATTTGAGTAGAAAACAGTATCTTAGTCAGATATTAACTCCAATCAAAACTCGGTTTGTTACTGTGGTACAAGCGCCAACATTTCGTAAAGACTGCCAACATGAAGCTTTCAAAGAAGAGGTGGAAAGATTACTAGAATGTTTTCGTGGTATTGCCAAGTCAACCGACAGACGGACTGTgtcttttctgtttacgtttctGGTTCCAGTTCTCGACGATTGCGTACCGTTGTTTGAAGTGTATTACAACTGCTCTGAAACTGTAGGAGTTTTGTTGTCCTTGTTATTAGAGGTTATTGAATCCCAACTTGGATTTCTTTCTAAGGCTGATTCTCGCAGACTACAGGAAATATGCGTTCGTTTAATTGAAGTTTATTCCAAACACACTCTTGGCAGACTTAACCGAAGCATCATGGCAGAAGAAGAGACATTTTTAGATCTGTTgatttttatgaaaattttaaCGACGATTTTAACTAAAGAATATTTCGATTTTACTTCAgATGAAGATGGTAGCGTTGCGTCTGGTCAAGATTGCGTCAATGTTGTTCTGTATGGATTGAATATTTTACTGCCTTTTATCACTCCCGAATTATTAAAGTTTCCCGAATTAAAAGAAGAATATTTCAAATTGGTAACATTTGTCTGTGAGGAACACACAGAGGCAATATGTCAGATACCTTTTGAGTTGTTCAAAAATTTAATAGCATCACTGGAGAAAGGTTTGAAGGAGTGTGGAACTGATATAGCTAAATCAACACTTGAAGCTCTAAGTGGCATGGCGGTAGATCTGTTTCGAAATCGACAACAGAAGAACGCTCTGACGGAGAGATTATCTACTGCTTTGAAATCTATGTTGAAGGTTGTTTTCAACTTTGTCCTGTTTGAAACTTTCGATGTTGTTGACATTTTTATGCCTGCTGCCGATGCATTATGGTTACTGATATGTTGTCATCAGGAGGAATACGCAAAACTCGTTAAAAATCTTTTGGTCTCTCAAACAGAACCTGTTCTACATCAAAGACTTGTAGACTCTTTCAACAAGCTAACACCAGCTGATGTTGACATTTCAATTGAAAAAGCCAGCAAGGAAAAATTCCGAAAAAACTTGGATTCATTTTTGGCTGATGTGAAAGGTTTGCTCTGCGTCAGGTAA

Transcript

BRAKERXEIT00000048809

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9C0E2	Exportin-4 OS=Homo sapiens OX=9606 GN=XPO4 PE=1 SV=2
Q9ESJ0	Exportin-4 OS=Mus musculus OX=10090 GN=Xpo4 PE=1 SV=2
Q5ZMR9	Exportin-4 OS=Gallus gallus OX=9031 GN=XPO4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003518 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08767 all species →	CRM1_C	CRM1 C terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR044189 all species →	Family	Exportin 4/7-like	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR014877 all species →	Domain	Exportin-1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12596 all species →	EXPORTIN 4,7-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005049 all species →	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0005643 all species →	Cellular Component	nuclear pore	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006611 all species →	Biological Process	protein export from nucleus	Interproscan
GO:0051169 all species →	Biological Process	nuclear transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25203	XPO4; exportin-4	-	Nucleocytoplasmic transport	ko03013	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.