Gene detail

Detailed information of BRAKERXEIP00000049732.1 in Muricea muricata

Genomic Location: :...
NR annotation: CAB4027662.1, tRNA (uracil-5-)-methyltransferase homolog A, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8BNV1	tRNA (uracil-5-)-methyltransferase homolog A OS=Mus musculus OX=10090 GN=Trmt2a PE=1 SV=2
Q8IZ69	tRNA (uracil-5-)-methyltransferase homolog A OS=Homo sapiens OX=9606 GN=TRMT2A PE=1 SV=2
Q96GJ1	tRNA (uracil-5-)-methyltransferase homolog B OS=Homo sapiens OX=9606 GN=TRMT2B PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05958	tRNA_U5-meth_tr	tRNA (Uracil-5-)-methyltransferase	Family	Interproscan
PF05000	RNA_pol_Rpb1_4	RNA polymerase Rpb1, domain 4	Domain	Interproscan
PF04983	RNA_pol_Rpb1_3	RNA polymerase Rpb1, domain 3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR010280	Family	(Uracil-5)-methyltransferase family	Interproscan
IPR007083	Domain	RNA polymerase Rpb1, domain 4	Interproscan
IPR007066	Domain	RNA polymerase Rpb1, domain 3	Interproscan
IPR042102	Homologous_superfamily	RNA polymerase Rpb1, domain 3 superfamily	Interproscan
IPR030390	Active_site	RNA methyltransferase TrmA, active site	Interproscan
IPR045850	Family	tRNA (uracil(54)-C(5))-methyltransferase, metazoa type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45904	TRNA (URACIL-5-)-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0008173	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15332	TRMT2A; tRNA (uracil-5-)-methyltransferase	EC:2.1.1.-	Transfer RNA biogenesis	ko03016	deepkoala