Gene detail

Detailed information of BRAKERXEIP00000049809.1 in Muricea muricata

Genomic Location: :...
NR annotation: XP_028409754.1, trafficking protein particle complex subunit 10-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERXEIT00000049809

ATGGAGTTTCTGCCAACTATAACATgCGATGGAGACTATGAAATATTCAGTGAGTATAAAGATGATATTCAGCGAAGACTGTCACACACAACGATAGAATGGAAAAGATCCCATGGCCGGCCTTCTAAGATGGTGGTGGTCAAAGGACAATGTGAAAGACTGACAAAAGATCATCTCAAATATACTATTGAAAACACCCCAAGTTTACGTGATCTTCCATTTTTTCACATGTTTTGGACAGAATGTCAGgattttgaTGATTATCGAAGTGATGTGAAGGAGCGTATCAACAAATGGTTAAAAAGCATTAAAGCAAGTGCTAACATTGATTGGTTTATAGTTCAAGTTATTACACATGGATCTTTGAAAGGCAACAAACCTAAACTTCAACTTCCTCGTAGCAGTGTCTTTGATAAAATCAAAAGTGATTTTGGTGGAGGAAAAGCAAATGAAAGGTGTATCCAGTTATGGGAACCATCAAAGCACGATGTCAACCCAAGATCTGTTGAGTCATGGCTGGCATTTATGGCCAAGCTACGACAATCTATCCTTGCAGCAGTTGATAGACACTTAAAGAAATTTGAAGACAAAGTTCGTAACACAAGAGATAAACGAACTGAAGATAATTGGGATTTTACAAAGTACTTTCTGTGTCATGAAGAAGTTGCAATGGTTTATGAAATGATGAACCTAAATGAGGAGGCGCTCATTCACTATGATGAAGTTGATGCTCTAATGAGTCAGCTTGTAAATCAAGTTAAAGCTTCAGatTATTCAGGGCCACTTACTCCATTCACGGGTGAATGCTGGTGTTGGGATGGTGCATCAATATCCTCTGGCTCAGAGGAAACACTTCACAAGACAATCAAGGAGAGAAAGGCAACATTGctggatatgaggaattatctTTTTATCAGGCAATGTGCATTATTATTCCAGCGGGACAGGGTTCAAGATGTTTTACAGAGAATGCTTGATTTCATGCACAATGTTGTCCAtgagttaaatattttgaatgTTTCAATTCCTTCTGGTGCTTCAGCTTGCTGGGTTACATTGAGCTCTCTACAACTGATACGTTCAACAATCCAGAAAGACCCAGAACTGGTGACATACAGCCTACATACAGCTCAAATCTATCAGTATGCCAGACAAAAGCTTTTTGAAGTTGGCCATTTGTGTGGTTTGATGCCTGATGAAACACCAACTGATAAGCAGTTACACTTGGCCTGTGAACTGTCTGGAGGTGTTGGGAAGAATGATGAAGGGAATCCCAGTAACAAACTTAAAATGGCATTATCATCCAAAGAAGGCTTCAAAGCTCTTTATTTGgaACTTCTGCAAATGGCCATCAAAACATATGAAAACATCAAACGGACTCGTTCGGCAAAAATACTTGGAATAGATTTAGGGAAATTCTATGTATCCGGAGGAAGTTATGGTGATGCTGAAGAATTGTTAACTGAAGGTTATAAAATGTTTGCTGAGGAAGGATGGGGATTGCTTGCCGCAAATACTTTACTTTCTCTTGCACAATGCCAGTACCAGTTGAGAAACTGGGAGAAATATCCTTTTACATCTGAGAACTGTCATAAATTAACTTGCCAGTCGCATCTTAAGAAAGAAGACACATTGTATTTTACTGAAGAATTGATGAGATTGAAAGACGAGAAAGAGCATGAAGACAAGCCTTTAACTATAAGAGCTGATCCCCTATTCAAACCAGAAACGGTAaaaattcatttaacaaaaaacaTCGCAACTGTTGGAGAAATGGTACATGTAGAGGTCCAGCTTAACAATGGATTGGAACGGGTTGTAAATGATTGtttattaaaaattgctatGAGAATGTCAGTGGCACCTCAAGATAGCGAACCAATAAGACTTTCGAGCGAAGATGAGCGTGTGGATCAGTCCAGTGCTTCTAATAATGGGTCAAAAAAGCCATTAAACGTTAGTGTTAATCAGCCTGCTGAAGACGAGAAAGTGAAAGAGAATTTTTCATTAAATTCAGAGAAGGTTCAGTTAACTTGTGGCAAACGGACATACCATCTTAAGGGCAAGACACAGAAAAGTGGTACCTACCTACTGCAACAGTTGATGATAAAAGTAGGAAATATTCATTTGCTTGCATCTCTACAACGTTTATTAAAGAAGTCAAGAAAGTTTGTCGTTGTCTCTGAATCGCCAAGTGTTACTTGGACCCAACGAACTCTTGACACTCCTCTAGTGGCAGGTCTTACCAACCTCGTTTCGTTGACTATAACTACTGGCCCAGCTGCCATACTTAATCAATCTATATTGGAATTGACCTCGGAGTCTGGCCTGATGTTTCAACCTATGGAATGTGGCCTAGCTGTGGTTATGTCACAAACAGATGAAGAATATACGAATGCAGAATACCACATTGAGTTAGTTGATGAGGATCACGAACAGAAGGATTCAAAAATGTCCTCAAGATGTTCAGTAAAGCTGCCGTTAATTCCTCCTTATCACAAGATACAAGTggatttgttgttgttttcgaaTTTTGACGACACAGATTCTGAACAACTGACGGTTGATCATGATGTGTTATCCTGTGCATCATGGTCGTCACCAAATTACTTGTCTACTTTATTTTTGACTTTCTACAAACCTTTTATATTCGAACATGTTCTTTATCGAACGAAATACGGTAAGTTTCTTCAAATGATTCTAACTGGAGCTACGAATACCGATATTGAAGTCTGCAATGTTGACCTAAAACACACAAATGAAACTGATCTCAACTGTAGTGAATTAATGCCCCTGCATTCTTCGACACCTCAGGTGTTATATTATCAAGGTGAACTCTCTTATGTTTGGCGTATAACGAAAGAATGTTTTAATGTCtcgaatttttttctcaatgttGTATATTGCTCAAAAACTAACGGCCAAGCAGGTGACAAATACACATACAAACACACATTTAAAGTTTAA

Transcript

BRAKERXEIT00000049809

Protein

Uniprot

Uniprot term	Description
Q3TLI0	Trafficking protein particle complex subunit 10 OS=Mus musculus OX=10090 GN=Trappc10 PE=1 SV=3
P48553	Trafficking protein particle complex subunit 10 OS=Homo sapiens OX=9606 GN=TRAPPC10 PE=1 SV=2
Q9VFB7	Trafficking protein particle complex subunit 10 OS=Drosophila melanogaster OX=7227 GN=SIDL PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11817	Foie-gras_1	Foie gras liver health family 1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021773	Domain	Trafficking protein particle complex subunit 11	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR045126	Family	Trafficking protein particle complex subunit TRAPPC10/Trs130	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13251	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006891	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0034498	Biological Process	early endosome to Golgi transport	Interproscan
GO:0048193	Biological Process	Golgi vesicle transport	Interproscan
GO:1990071	Cellular Component	TRAPPII protein complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20307	TRAPPC10, TRS130; trafficking protein particle complex subunit 10	-	Membrane trafficking	ko04131	deepkoala