Gene detail

Detailed information of BRAKERXEIP00000051428.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB4020274.1, 2 -5 RNA ligase [Paramuricea clavata]
Species abbreviation MMURI · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000051428

ATGGCGTATTTGAAGCTTGACCACTGCAAGAAGAACATTGTTGTTCTCCTTGGTCCAACAGGGTGTGGGAAGACTACTTACGCAAAGGAGTCGTTAAAACGTCAGTATCCTTCAAGCACATTTTTGTCCACTGGAGATAAGCTTCGCGAAGGGAACTATATTAACGCATGGCAGGAGCCGAATAtggatgaaataaaaaatttttgccATACGTTGATTGGTACAACCTTGATGGAATTCCAAAAGTCAGAATCAGCCGTGCTAATATTGAATTGTGTTAAAGATTTGAAAGACGCGGAGTTTGTGACAGCAGAAGCAAAGAAATATGGCCTTCAAATCACGGCAGCATTGTTATTTGATATTGACGAAGAACAATTAAACGAATTCTGGAACAAGCGCTCCAGAGACACTGATAATTTACGTATGATGTGTGTTTCTACTCGTGAATATCTTTACAAATGGAAGCAGAAGTCAAATGATCTATGCAACTACtataaacatttaaaattgcttttcttGAACCTATCACATCATTCTTTTTGGGATATAAAGCCTGAACTATGTCGAATTTACGAATCTCCAAATAACCTGCAGTTTATGCTTCTGGAATCAAATGGAATAAAGAGTGTCTTGACAAGTTTGCAATCCGTTTTAAATGTTTCCCAATTTGAATTTACTCTTCCAGCTTCATTTGTTCACTGCTGTCGTGATGTTAAGTGGGTTGCAAATCCGACACGGTACTATGTTACCATTAAGGCAGACGGTGTACGTTGTCTGTTGTTCAAAACCTCGAATGGAACGTATTTAATCACCAGGAAACACGAGATTTATCCTTGCCAAGTTGCTGATGATCAGTTGTCTGAAAACACAGTTTTGGATGGAGAATTGTTGCCATCTATTTCCATGTCCGATATTCACCCAAAGATGAGCGCAACTCAGCTGAACACAAGTGTTTTCCTGGTCTTCGATGTTCTTGCTGCAGCCGGGGATGTCTTGTGGAGATGGCCGTTCAGTGTGAGATTGCAGAGCTTGGGTGAACTTTCTGTTCGGAAAGATGTCATCGCTGTAATAATGGAAGCATCGTCAGATATTCAACTTTCGCCCAGCGTCAGTTCAGATCCCAGGCTTACGGTCCATTGTGCCCTCAAAGGGCATCGTAAATCTACTCCGCGAACCATCCTGACCTGTCTCGACACTGCATTTCCATATCCAAGTGATGGTTTAGTTTTTACACCAGACAAGGCTTACCTCTTTGGACCTGATCCACTCCTGTTCAAATGGCAAAGTGAAGATGATGTTCGTTGCGATATTCAACCGTCACGCGTTATCCAACCATTTCAACTTCTCAACAAAGAGGTGATCGAGTGTCGTTGGAATTCAGCAACAAAATCATGGGTCCCACTTTATGTACGCAGTGATAAAGCCAGACCAAATTCTGATAAAACTGTTGCTCATTTGAGGAAGATTTGCCAACAGCCATATACAAAAGATTATCTCAAATACGATATTACTCAAGTCAAAATTTTTGACAAACACGAGGACGATGAGGTAGCATTAAATAATAAACCAAGCAAGCAGTCTGACTGTGGTCATCCGGCAGTTGAAGGCATTTCTTTTGACAACCTGTTTTCTGGCATTAATCAGTTAGTTCAATGTGGTGAAGTTGAAAAGACAGTTGATGATGCCACAAACCTGGAAATCATTACCTATCGTGCAACCGCTTCATTTAGTAATCATATCGTAGGTCTATATCGTGGTCTTGTTCTACATCCACCATCAAAAACTGTTGTGACCAGGCCCTTTGTGAGATTCTATGAAGACGTGGGTTGTcgcaattcaaatgaaattgTAGAAGCTACCATAAAGTATGATGGATCACTTGGTATAGCATTCACGTGGAATGGTGAAGTCATGGTGACAACTAGGCGACGAATGGATTCCCAGCAAGCAATATGGGCGAAGCAATGGATCAAAGATCACTGTAACCTGACCAAATTTCAAGCTGGTTACACGTATctgtttgaaattatttaccagGACAACACCGTGATTGTAAGCTATCTGTTTGAAGGTCTTGTCTTGCTTGCTATCACTGACGAAAGTGGTCACGAGTTACCCTACGAGGAGTTATTAAAATGTGCTAGAACCATCGGATTCTTCATGGTAACACCACGAATTACTGGTTCATATTCAGACGTATTGTGGTACTGTGGTGGAATTGAGTCTAGTGAAGAGCCAACCACATCGAAAGGGCCGCCATTTACTTCGGGTGCTCTGCCAGTGAATGAAAGACGACAAGAAGGTTGGGTTCTGAAATTTAACGACGGGAGCAGGCAGAAAATTGTTTACAGTTGGTGGAAGGATGTATTGAAACTTGCCAGCCTTGTTCACCCTCAAGTGGTTTGGCTTTTGCTCAAGCATGATAAATTGGCAGAAGTTTTTGGGAATGCACCATATCCATATCACTTTCAATTGGAAATTCGCCGCATGGTCCAAGCAATGGGAAGGAAGTTCGAAAAAATGTTAAGATCAATTGAAAAATCTATTGAACAGACATTATTTGCATGTGTTTATGGTTCTTCACGCAGTTTTATTGATTTGTGGGACAAAACGATAGATGCTATGATTGAGTATGTACAAAAAACCGAAGAAGTCACGTCAGTGCCATCTAATGAAAGAAACGATCGTTTGCGCCAAATTTTTAACTTGCTTAAACCCTATACCCGTACGCGATTCAGAGCTAGGACTAGAAGGCCACTGGAGGCAACTCAAGGCCTCTTGGCCTTGGTTGATAGTGGTCAGTATCGTTCGCCGTTTTACCAAAGCATCAGTCAAAATGTTCTTCGACTACCATTTCTGGATTATATCTGCCCTACCTCTCCCGCGTTAGATTGTTATGAACCGAGCGACAACTTCAAGCAAACATGGTGCAAGAAATGGCAACAGATTGCGATACTTGATCAATGGCAATTTTTGCAGACCGTTCTGCAAAGGAGCAACGACGTCCCTCCCTTTTTACGACTGCCAGCCGAGGCAATTGTAATGATTCTACATTATCTTGATTATGAAAGTTTGATGTCCGTTGCCAAGGTATGTGTATATATAAGGAATGTTGCAAAATCCTGCAAGACACTTTTTGCGTCGAAAAAACTTTTTGCGTCGAAAAAACTGTCCgcgtcaaaaaaacaaagaatgcAGCGAACGACAAGCTATGCACGGCCGCCGACAGGCAACATGTTTAGACGTATGGCATGTGGTGGCAGGGATTCAGACCTGTCCAGTGGTTCAGGCAGCCATACATACGTCAGACATACGTCTGAAGGGTATGCTCACGTTGTCGCTTCTGATGATCCAAGTACATGGTATTGTGATTATTAA

Transcript

BRAKERXEIT00000051428

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013091 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01331 all species →	mRNA_cap_enzyme	mRNA capping enzyme, catalytic domain	Domain	Interproscan
PF09511 all species →	RNA_lig_T4_1	RNA ligase	Family	Interproscan
PF12937 all species →	F-box-like	F-box-like	Domain	Interproscan
PF03919 all species →	mRNA_cap_C	mRNA capping enzyme, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051029 all species →	Family	mRNA Capping Enzyme and RNA Phosphatase	Interproscan
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR001339 all species →	Domain	mRNA capping enzyme, adenylation domain	Interproscan
IPR019039 all species →	Domain	T4 RNA ligase 1-like, N-terminal	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013846 all species →	Domain	mRNA capping enzyme, C-terminal	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10367 all species →	MRNA-CAPPING ENZYME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004484 all species →	Molecular Function	mRNA guanylyltransferase activity	Interproscan
GO:0006370 all species →	Biological Process	7-methylguanosine mRNA capping	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000051428.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.