Gene detail

Detailed information of BRAKERXEIP00000052509.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB4016888.1, Hypothetical predicted protein [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000052509

ATGACAACAGTCgcaaaaaagttttgggaatATATGAAAGAGAGTGATCAACTAGTGGAGACCCGGACGGAGCTTAGAAATTTATACAAACATGAGTTCTTGCCAGTTCTTGTTGACCCTTGGGAAAGATTGGTGCCATTCCGCGATGTATTTTGGATGTTCAGAACTAGCTTAAAAATTGTACAGAAGAGGCCAGTGAACGATAGAGAAATCATAGTGTATCTGGCCGGGAGAGAAGAAGAAAGGCAGCCACAAGAAGGGCAGAGGCAAAATGGAGATGGCTTTACTGAATTGAAAAAGAAACTGGTGGATCGCAGGCACAGGCTTCATTTGACCAAAGACAAAGGCGGTGTGAGCGTAGAGCCAGAATCAAACAGTGATGGTATCGTCAATATGGATGTCTCTTCAAAACGTCTCAAGCTTACAGTAACCAATGAGATGGACACAGATCTAGTCATGCAGTGTGCCATTCTTGGTTCatttggtccatttcaaatctGCCACAGCCAGCATCAAGAAATCATCACCGAGGCTATGTCTGCAAGGCTAGGAGGGTTGAGACGAACTGTTTTTGATGTGAAATTAGCACGGTCACCAAATCCTGGCATTTATTCTCTCCCAATTGCATTTCGATTCAATCGTGATTACGACGAACCCTTCCATATAGTGAAGTACATAAAAGCGGTAATTGTTGATGATGTTGTGATGAGGCTACAGCCGACAAAACCATACAGACGTCGAAAACGTTTTGCCCTGTTGAACAACCGTGATGTTGAAATTGAACGTGGTGTACCACCTTGTGTAGAGAAACCAAGGTATATTGTCAATCTGCCTTCTTACCCCATCCCATACGACATACAACGCCATGAAATGAAAATCGACCGACTTCGGGAGCTATTCGAAGCTTTCCGAGATGGAGATTTTCACAACCCAGACAAATATAGAGACAAGTTCTCAAAACTGCTCCATGTAGAAGAGCTACAAATGAAGGTGGACATAGCAAAATATCAGATGGATAGTGCGAAGTTGATTGAAGAGCGGCCGTACCTGACGCTAGACGTACCGGGGCTTGCCGAGAATCGGCCATCATTGGTGCGAGGTGATCGCTTGTTTGTAAAGAAGTTGGCTGCAGATGGAACGGTTGAAAACGAAAACATCAAATACGAGGGTTATGTGCATGCTGTTGGACTGAACAAAGTCTACTTGAAGTTCAGTGCCAGATTTCACGATCGTCTTTTTGTAGCCAATTCATCTTTCCAAGTAAACTTTGAGTTCAGTCGAACCACGCTCAAAGTTATGCATCGAGCAGTTCAAAATGCCGCTCCATTTTTGGGCCTTATGCCCTCTGATGAAGAACCATCTGGTAGCGTCAACTACCTGCGGATCCCGAGGCAAATAACTAGATATTTTGATGGCAAGATTGAGGAAAATGGCGAGCAGAAACAAGcagttgaaaatatagtcgcAGGAACATCGAAACCGTATCCCTATCTTGTCTTCGGACCCCCCGGAACAGGAAAGACAGTGACTATTGTGGAAGCTATTAAACAGGTGTTAAAGAATTACCCTGACAGCAAGATCTTGGCGTGTGCTCCATCGAATAGCGCCGCTGATCTCATTTTGGAACGAGTGGCTCAACATCAGGTCGTTCCAAAAGGACAGATGGCTCGTCTCAACGCGTTTGGTCGTCATGAAAATTCTGTGAGCAAAAACGTTCTGGAATACTGCGTTCCGGATGGAGACGGTTTCTTCCGTCTGCCTTCGAGAGGAGACATCGAGAGCGAATATCGATTTGTTGTCACCACTTTGATAACAGCTGGAAGGTTGGTGTCGTTGGGAATTCCGAAGTCACATTTCAGTCACGTGTTTATTGACGAGGCGGGGCAGGGCATGGAACCGGAATGTCTGGTACCTATTGCAGGATTGCTGGGGACAGATCAGGACAATCCTGGGCAGCTGGTGTTGGCTGGGGATCCTAAGCAACTTGGTCCTGTTCTCCGATCACCTGTTGCTATTGAACATGGTTTAAGAATGTCATTGCTGGAGCGCCTTATGACTTCAAATTTCCGCTGCTATGAACGTCAACTCTTAACAAACCAGTACGATCCAAATTGTGTCACAAAATTGTTGAATAATTATCGATCCCATCCTGATATTATAAAAGTGCCAAATGAGTTGTTCTACGATAACGAGCTACGCGCCTGCGCAGATGTAGTGCTCCGGAACTCTCTATGTAACTGGGACGGTCTGAAGAGGCCAGGTTTCCCAGTCATATTCGAAGCCGTCTTCGGCAAAGATCAAAGAGAAGAGAGTAGCCCTTCGTTTTTCAATGCCGAGGAGGTGTCGGTCGTGCTCCGTTATGTGAGAGAATTGAAGGATGCCAGAGGGATACCATTGCAAATGTCGGAGATTGGAATTATTTCACCTTATCACCGACAGGTTCAAAAGATCCGTCAAGAGCTGCGCAAAAGGCCGTTGAGGATCGGAGACATCAAAGTAGGATCTGTTGAAGAATTCCAAGGTCAGGAACGAAAAGTGATCATCATCTCAACTGTACGAAGCAGCGAGGAGTTTCTACAATTGGACGCACAACACAAACTCGGTTTCCTCAATAACCCCAAGCGATTCAACGTCGCCATCACTCGGGCCAAGGCGCTCCTTATTGTGATTGGAAATCCTTACGTTTTATGTCACGACGAACATTGGAGGAAATTCATTAAACACTGTATCGATCACCGATCATTTTCTGACGGATCTGGCTCGGGTTCATCCGGGAATCTTTTTCAAATGCCCGAAGATGCAGATGAAAGCCTTGCCGAAAAACTGGAGAGACTTTGCCTCGATGACAACTCGTTGTTCGAGAACGAAAGTGATCTAACCGGAGCTGATTACGAAGATACCCCTTGGCGGTCAGACGAataa

Transcript

BRAKERXEIT00000052509

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q1LXK4	Putative helicase mov-10-B.1 OS=Danio rerio OX=7955 GN=mov10b.1 PE=2 SV=2
P23249	Putative helicase MOV-10 OS=Mus musculus OX=10090 GN=Mov10 PE=1 SV=2
Q1LXK5	Putative helicase mov-10-B.2 OS=Danio rerio OX=7955 GN=mov10b.2 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000828 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13086 all species →	AAA_11	AAA domain	Domain	Interproscan
PF13087 all species →	AAA_12	AAA domain	Domain	Interproscan
PF21634 all species →	MOV-10_beta-barrel	Helicase MOV-10, beta-barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR026122 all species →	Domain	Helicase MOV-10/SDE3, DEXXQ/H-box helicase domain	Interproscan
IPR041677 all species →	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR047187 all species →	Domain	Upf1-like, C-terminal helicase domain	Interproscan
IPR045055 all species →	Family	DNA2/NAM7-like helicase	Interproscan
IPR041679 all species →	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR049080 all species →	Domain	Helicase MOV-10-like, beta-barrel domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10887 all species →	DNA2/NAM7 HELICASE FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0032574 all species →	Molecular Function	5'-3' RNA helicase activity	Interproscan
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0035194 all species →	Biological Process	regulatory ncRNA-mediated post-transcriptional gene silencing	Interproscan
GO:0043186 all species →	Cellular Component	P granule	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18422	MOV10; helicase MOV-10	EC:5.6.2.5	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.