Gene detail

Detailed information of BRAKERXEIP00000053355.1 in Muricea muricata

Genomic Location: :...
NR annotation: XP_028395222.1, LOW QUALITY PROTEIN: dynein beta chain, ciliary-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERXEIT00000053355

ATGGAGTTTAGTGACCCACGTTTTGACTTCTTGTCGGACTATGTCCTGAAGAGCATGAAACTCAAAAATGACAAGTGGGCAAAGATGGAAGGCAACGAGGAATACAGGCAACAAATTTTAAACTTCTTCGAGAAGCCAGAGTTACATTTGCTTGTAATAATGCAGAATTCAGCGGGACAACTGCAACCGCTTTACGACTTTCCACTCACGTTGAAAACGAAAGCCGTTTATATTGCAAAAAAAGAGAAATCCGTGAATATCGGCAAAGACAATGTGAAAACAGCCCTGGCGTTTGGAGACCTATCCTACGCACCGCCAGAACAGCTTTTTGCTCTCGTTGAAGagATTCTGGTTCCTCTGTTATCAAACCAAAGAAATCATGAACAGTGGCCTGCGGTTGTGTCACATGATGTGTTACGTCATGTGCATTCTTTGAAAAGCAATGTGTTTGTAATTGCTGGTCAGGTTAAGGGGAAAACGTTGTTACCACTGCCTGTGGGATCAGATCAAGTGTCTGACGCTTGTGAAGCTGATGAAAGAGGGGAACAATTTGATAGAAGTTTGGTTCATTCCATTGAATCAATCATCATCGATTGGTCGCATCAAATACAGAATGTTCTTAAGAGGGACTCGGCTCAGCCACTTCTGGAGGGAACCAACCCTGGTCCCATTGTTGAGCTTGACTTCTGGAAAGCAAGGGCTGAGAATCTTGAGTGCATTTTTGAACAGCTCAGGGACGATCGCGTAAGGAGCATGGCCGAGCTGCTAGAGAAAACACAGAGCAGCTATTTCTTGGCATTCAAAACGATATTTAGAGAAGTtatatgtgCATTGGAAGAAGCGAGGGATATCAACACGTTCCTCAAGCCGCTGAGGAGGCAACTTGAAGATATGGAACAGTACGACTTCACAGAAATTGAGAAAGTCCTGCCTGCTCTGATGCACACCATTGGTCTGATCTGGGCTAACTCAAAGTTCTACTGTCGACCTGCCAGAATCATTGTGCTCCTGCAAGAGATGTGTAACATGCTCATTGAAATGGCTCGCAACTTCCTCGACCCCGCCGAGATATTCAAGGGCGAAGCAGAAGAGTCGCTGGAAAAAATCCAGGTCGTTCTGAAAGTGTGCAGAATGTGGAAGGAGCTGTTCTTATACACGAGAGCAAACATGAGTCAGCTCTATAAAGATCCAGAGAAAGTCAAGAACTGGGAGTTTGCCAACGAGCTTGCATTTGCCAGGTTGGATAAGTTCGTGGAACGTGTAGCAGTTGTCGAGGAGCTTTTCTCGACCGCAATCGAATTCTGCAAGTTGGAGAAAGTCGAAATCGGCGGCATTAAAGGAAAAATGCTGAGTCATCAAGTTGTTGAAATATTCGAAGAGTTCACCGAGTATTTTGCAGTGTTTGGAAACAGAACCTATGACGGTCTAGATGCAACGAACAAAGAATTTGTCGATGATTACAATGACTTCGCAAGCAAGATTGCAGACTTGGATCGACGTCTCGCCTCAGTTTTATGCCAAGCGTTTGACGACAGTTGCGGAACACTGGGCATTCTCAAGCTTCTCGATTGCTTTGGCTCTCTCATGGATCGGCCTCGCATACACGCAGACTTCGAACACAAGTATCCTGTACTGCTCTCCATGTTTGAGGACGATCTGGACACGGCGAAGATCATATTCGATCAACAGCAGACCTACGAGAGCAACGAAGAGACACTGCCGATCAACAAAAACAAACCGCCAATCTCTGGCTGCCTAAAGTGGGCCCAGGAATTGAGAGAGAGAATTAAAACACCCATGGGCAACCTTAAGCTGTCTCTAAATCACGGTATTCTCGAAAGTGCCGAGGCGATGACCATCTTGAACAAGTACGACGAAATGGAAGGCTTACTCACCGGTTATGAACAAAAGACGTACGAGAAATGGACAAGAAGCGTAGGCGATGTTGCCCAACAGAATCTTGATAAACCTCTCATCGTACGAGATCCGCAAACGTTGTTAATCAAAGTCAATTTCGATCCTGAGCTCATCGCGTTACTGCGTGAAGTAAAGTACTTGGATCAAGCTCAGAACGAGGTCATCGACACCATTCCTGATAGCGCAACGTGTGTTTACCAACGAAACGAGACGTTCCACAAGTACTGCGCGAATCTCGATCTCACCGTCGCTTGGTACAACAACGTCAGGCAAACGCTGCTTGAAGTGGAGTTCCCCTTAGTGAAAGGACAACTGAAGGAGATTGATGAACAATTGGAGCAAGCTGAGAAAACCTTGACCTGGAATAGCGATGGTGTATGGGAGTACATAGAAAGAATACGTGATCAAGTTCATGACTTAGAACGGCGAGTACAAGCGGCCAAAGACAATGTCGAATCTGTTGGTCAACTCATGACGAAATGGTGTGATGCTCCTCTGTACGAACGTAAAGGAGAGAAACGAGAAGGCCTATTGAATATAGAGGAGAAAGAAATCACTCTGAAGAAACGCTACAGTATGATCGAAGACTCGGGACAGAAGATCCACGAATTATTGAAGCAAAATCTGGAGCTCTTCAAGGCGGACGCGTCCTCAGAAATCTGGCGTGCCTACGTGGATTACCTCGACGACATGGTCGTCGATGGCTACTTCAATGCGATTCACGCTTCGCTCAATTACATCCTGGACAATACAGACCCTAAGACGAACACGCTGGCGATATTTGAGGCGAAGTTGGAACTGCAAGCCCCGGACATGGTCTTCATACCATCACTGGATTACGTCAGCGGTAGCTACGGGTTCTATGATATGGTCGAGGGTATTGTCAACGATATTTACTCCATGGCAACTCTCGTTGCTAGACTGGCTGAACACAACGAGTCCTCGCATTATCAGGCTGATCTGGAGGACATGCTGGAGTTGTCTGAGATGAGACAAGAGATCATGGAACGTGTAACAACGGTTATAAACAAAGCTACAGAATACAGAAACTCTTTCGATACCTACGCGTATCTGTGGGTTGACGATAGAACTGAGTTCATGAGACAATTCTTGCTGTACAATCACGTCCTCACCGCCGAGGAGATAGAAGCACATGTGGAGGACGGTGTACCTGAATGCCCGCCAACACTGGAACAGTTTAAGGAACAGATTGACACATACGAGAAATTATTCGTGGAAGTGGACGCTTTCAAAGGAACGACAATGTTTGACACTTGGTTCTGCGTTGATGCTAAACCGTTCAAACAAGCTTTGCTGAACATCATCAAGCGATGGAGTTACATGTTTAAGCAGCATCTTATTGACCACGTCACAAATAGTTTGAACGACCTGGTAGAGTTTATAAAGGTGGCCGATGTTGGTTTGGCTCAGGAGGTAGAAGAAGGAGATTATGATGGTTTGGTAGCAGTTATGGGTCATTTAATGGCTGTGAAAGATCGCCAGGCCACCACGGATGAGATGTTTGAACCTTTGAAACAAACCATCGAGTTGTTGAAGACTTATGGTCAGGAATTGCCGGAGGAAGTACACATGCAATTGCAGGAACTACCTGAACAATGGAACAACTGCAAGAAGAACGCAGTGACCGTGAAACAACAGGTCGCTCCGCTACAAGCAGCAGAGGTTGCCATCATCAGAAGGAAATGTGGTCAGTTTGATGTTAAACAACACGAGTTCAGAGAAGACTTCAGAAAGACAGCACCATTCATGTTTGACTCACAGAACGTTTATGAAAAACTTGACAAGGCTAATGGTCAAATTTGTGCGATGGAGAAAGAAATGAAGATGCTGGGCGAGTCAGCAGGATTGTTCGAAGTCAACTTCCCCGATTATAAACAACTTCGCGCCTGTCGTCGGGAGGTGTTCCTCCTCAAGGGACTCTGGGATATGATCTACGCAGTGCTCACGAGTATCGACGACTGGAAGACGACGTTATGGAGCGATATCAACGTCGAGACGATGGAAATGGAATGCAAGCGATTTGTGAAAGAGATTCGAAGTTTGGACAAAGAGATGAGGGCGTGGGATGCCTTCACGGGGTTAGATTCGACCGTAAAGAACATGGTCACCTCGTTGCGAGCCGTGTGCGAGCTCCAGAATACTGCTATCAGAGAACGACATTGGCAGCAGCTCATGCAAGCCACTCAGGTGAAATTCATCATGGACGAAGACACGTGCTTGGCTGACCTGCTGGCGCTAAACCTGCACGATTACGAAGACGAAGTACGAGGCATCGTGGATAAAGCCACGAAGGAACTTGGAATGGAGAAAGTTTTGGGCGAACTTGATGTCACCTGGTCGTCGATGGAGTTCGAATACGAGACTCATCAACGCACGCATATCTCATTACTTAAATCTAGTGAGGAACTCATAGAGACCCTTGAGGATAACCAGGTTCAACTGCAAAATCTCATCACGTCCAAATACATCGGCCATTTCTTGGAAGAAGTGTCGACGTGGCAAAAGAAACTGTCCACCGTCGATTCCGTTATATCCATCTGGTTCGAAGTTCAGCGCACCTGGTCTCACTTAGAAAGCATTTTCATTGGTTCGGATGATATTCGAAATCAACTACCTGAAGATTCAAAACGCTTTGATGGCATCGACACAGACTTCAAGGAATTAATGAGTGATGCTGAAAAGACGCCTAACGTAGTGGAATGCTGTTGTAAGGAAGGCTTGTACGAGAAGCTTGAGAACATTCAAGAAAGACTTTCTTTGTGTGAGAAAGCTCTGGCTGAGTATTTGGAAACGAAACGTCTTGCTTTTCCTCGGTTTTACTTCGTGTCCTCGGCCGACTTGTTGGATATATTGTCCAAAGGCAATATACCTGTTGAGGTTGCCCGTCACTTGTCAAAACTATTTGACAACATGGCAGCATTGAAATTCAACCAAAATGATGACGGAGAAGATCTAAAAGAAGCCATTGGAATGTACAGCAAAGAGCAAGAATACGTCAACTTTGATAAGATATGTGACTGCAAAGGACAGGTAGAGGTTTGGCTAAACAGAGTTATGGAAGCGATGCGATCAACCGTGAGACACGAACTGTCAGAATCTGTTGTTGCTTACGAAGAGAAAGCCAGAGATCAATGGCTCTTTGATTATCCTGCTCAGGTCTCCCTCTGCGGGACTCAGATCTGGTGGTCTACTGAGGTCGGTATTGCGTTTGGACGGCTGGAGGAAGGATACGAAAACGCTTTGAAGGActattacaaaaaacagGTCGCACAACTGACGACACTCATCAACCTTCTGATTGGCGATTTATCAAAAGGCGATCGACAAAAGATCATGACGATCTGTACAATCGATGTCCACGCTCGTGATGTTGTTGCTAAACTCATTCAACAGAAAGTAGAGAATGCACAAGCGTTTGCTTGGCTCAGTCAGTTACGTCATCGTTGGGACGATGCGTCCGGTCATTGTTTTGCCAATATCTGCGATGCTCAGTTCAAATATTCTTATGAATATCTTGGCAATACTCCTCGTCTTGTTATCACGCCTTTGACTGATAGGTGCTACATCACTCTGACCCAGTCTCTTCATCTCACAATGAGCGGTGCCCCAGCCGGACCTGCTGGTACTGGTAAAACAGAAACGACAAAAGATCTGGGGCGAGCACTTGGTATTATGGTCTATGTGTTTAACTGCTCTGAACAGATGGACTACAAGTCCTGTGGTAACATCTACAAAGGTCTTTCTCAAACCGGTGCGTGGGGTTGTTTTGATGAATTCAATCGTATCTCGGTCGAAGTACTGTCTGTTATTGCTGTACAAGTGAAGTCCATACAAGACGCTATTCGGGACAAGAAAGAAAGGTTTATATTCCAAGGGGAAGACATCTCACTTGTGCCCACTGTGGGCATATTTATCACCATGAATCCAGGTTATGCAGGACGTACAGAATTGCCTGAAAATCTCAAAGCTTTGTTCCGGCCATGTGCGATGGTGGTACCAGATTTCGAGTTGATCTGTGAAATTATGTTGGTGGCTGAAGGTTTTATTGAAGCAAGATTGTTGGCTCGTAAATTTATCACTCTTTACTCGCTTTGTAAAGAATTACTTTCAAAACAGGACCATTATGATTGGGGTTTGCGAGCCATCAAGTCTGTGTTGGTCGTGGCTGGATCACTGAAACGTAGCGATCGTGATCGTCCTGAAGACCAAGTTCTCATGAGAGCTTTACGTGATTTCAACATTCCGAAGATTGTTACTGATGACGTGCCCATCTTCATGGGGCTTATTGGAGATCTCTTCCCATCATTGGATGTGCCCCGTAAACGAGACATGGACATGGAAGAGAGCATCAGAAAAGCTGTTTTGGACTTGAAACTGCAACCAGAAGAGAGTTTCGTGCTGAAGGTTGTTCAGTTGGAAGAATTATTGGCTGTGCGTCATTCAGTTTTCGTGTTGGGACCAGCTGGCACAGGGAAAACACAGGTGATCAAATCGTTGTTTAAGACATACCAGAACCAGAAACGTAAACCGATGATGATTGACATTAATCCTAAGGCAAGAATGGAAAGACGGTCTATTTTCAACATCAATGCGTGA

Transcript

BRAKERXEIT00000053355

Protein

BRAKERXEIP00000053355.1

MEFSDPRFDFLSDYVLKSMKLKNDKWAKMEGNEEYRQQILNFFEKPELHLLVIMQNSAGQLQPLYDFPLTLKTKAVYIAKKEKSVNIGKDNVKTALAFGDLSYAPPEQLFALVEEILVPLLSNQRNHEQWPAVVSHDVLRHVHSLKSNVFVIAGQVKGKTLLPLPVGSDQVSDACEADERGEQFDRSLVHSIESIIIDWSHQIQNVLKRDSAQPLLEGTNPGPIVELDFWKARAENLECIFEQLRDDRVRSMAELLEKTQSSYFLAFKTIFREVICALEEARDINTFLKPLRRQLEDMEQYDFTEIEKVLPALMHTIGLIWANSKFYCRPARIIVLLQEMCNMLIEMARNFLDPAEIFKGEAEESLEKIQVVLKVCRMWKELFLYTRANMSQLYKDPEKVKNWEFANELAFARLDKFVERVAVVEELFSTAIEFCKLEKVEIGGIKGKMLSHQVVEIFEEFTEYFAVFGNRTYDGLDATNKEFVDDYNDFASKIADLDRRLASVLCQAFDDSCGTLGILKLLDCFGSLMDRPRIHADFEHKYPVLLSMFEDDLDTAKIIFDQQQTYESNEETLPINKNKPPISGCLKWAQELRERIKTPMGNLKLSLNHGILESAEAMTILNKYDEMEGLLTGYEQKTYEKWTRSVGDVAQQNLDKPLIVRDPQTLLIKVNFDPELIALLREVKYLDQAQNEVIDTIPDSATCVYQRNETFHKYCANLDLTVAWYNNVRQTLLEVEFPLVKGQLKEIDEQLEQAEKTLTWNSDGVWEYIERIRDQVHDLERRVQAAKDNVESVGQLMTKWCDAPLYERKGEKREGLLNIEEKEITLKKRYSMIEDSGQKIHELLKQNLELFKADASSEIWRAYVDYLDDMVVDGYFNAIHASLNYILDNTDPKTNTLAIFEAKLELQAPDMVFIPSLDYVSGSYGFYDMVEGIVNDIYSMATLVARLAEHNESSHYQADLEDMLELSEMRQEIMERVTTVINKATEYRNSFDTYAYLWVDDRTEFMRQFLLYNHVLTAEEIEAHVEDGVPECPPTLEQFKEQIDTYEKLFVEVDAFKGTTMFDTWFCVDAKPFKQALLNIIKRWSYMFKQHLIDHVTNSLNDLVEFIKVADVGLAQEVEEGDYDGLVAVMGHLMAVKDRQATTDEMFEPLKQTIELLKTYGQELPEEVHMQLQELPEQWNNCKKNAVTVKQQVAPLQAAEVAIIRRKCGQFDVKQHEFREDFRKTAPFMFDSQNVYEKLDKANGQICAMEKEMKMLGESAGLFEVNFPDYKQLRACRREVFLLKGLWDMIYAVLTSIDDWKTTLWSDINVETMEMECKRFVKEIRSLDKEMRAWDAFTGLDSTVKNMVTSLRAVCELQNTAIRERHWQQLMQATQVKFIMDEDTCLADLLALNLHDYEDEVRGIVDKATKELGMEKVLGELDVTWSSMEFEYETHQRTHISLLKSSEELIETLEDNQVQLQNLITSKYIGHFLEEVSTWQKKLSTVDSVISIWFEVQRTWSHLESIFIGSDDIRNQLPEDSKRFDGIDTDFKELMSDAEKTPNVVECCCKEGLYEKLENIQERLSLCEKALAEYLETKRLAFPRFYFVSSADLLDILSKGNIPVEVARHLSKLFDNMAALKFNQNDDGEDLKEAIGMYSKEQEYVNFDKICDCKGQVEVWLNRVMEAMRSTVRHELSESVVAYEEKARDQWLFDYPAQVSLCGTQIWWSTEVGIAFGRLEEGYENALKDYYKKQVAQLTTLINLLIGDLSKGDRQKIMTICTIDVHARDVVAKLIQQKVENAQAFAWLSQLRHRWDDASGHCFANICDAQFKYSYEYLGNTPRLVITPLTDRCYITLTQSLHLTMSGAPAGPAGTGKTETTKDLGRALGIMVYVFNCSEQMDYKSCGNIYKGLSQTGAWGCFDEFNRISVEVLSVIAVQVKSIQDAIRDKKERFIFQGEDISLVPTVGIFITMNPGYAGRTELPENLKALFRPCAMVVPDFELICEIMLVAEGFIEARLLARKFITLYSLCKELLSKQDHYDWGLRAIKSVLVVAGSLKRSDRDRPEDQVLMRALRDFNIPKIVTDDVPIFMGLIGDLFPSLDVPRKRDMDMEESIRKAVLDLKLQPEESFVLKVVQLEELLAVRHSVFVLGPAGTGKTQVIKSLFKTYQNQKRKPMMIDINPKARMERRSIFNINA

Uniprot

Uniprot term	Description
P23098	Dynein beta chain, ciliary OS=Tripneustes gratilla OX=7673 PE=1 SV=1
P39057	Dynein beta chain, ciliary OS=Heliocidaris crassispina OX=1043166 PE=1 SV=1
Q9UFH2	Dynein axonemal heavy chain 17 OS=Homo sapiens OX=9606 GN=DNAH17 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12774	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan
PF08385	DHC_N1	Dynein heavy chain, N-terminal region 1	Family	Interproscan
PF08393	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026983	Family	Dynein heavy chain	Interproscan
IPR035699	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR042222	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR043157	Homologous_superfamily	Dynein heavy chain, AAA1 domain, small subdomain	Interproscan
IPR013594	Domain	Dynein heavy chain, tail	Interproscan
IPR042228	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR013602	Domain	Dynein heavy chain, linker	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46532	MALE FERTILITY FACTOR KL5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005858	Cellular Component	axonemal dynein complex	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0030286	Cellular Component	dynein complex	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10408	DNAH; dynein axonemal heavy chain	-	Cytoskeleton proteins	ko04812	deepkoala