Detailed information of BRAKERXEIP00000054199.1 in Muricea muricata

Genomic Location: chr9:12757669...12760116
NR annotation: CAB3993813.1, Target of rapamycin complex subunit lst8 [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DCJ1Target of rapamycin complex subunit LST8 OS=Mus musculus OX=10090 GN=Mlst8 PE=1 SV=1
Q17QU5Target of rapamycin complex subunit LST8 OS=Bos taurus OX=9913 GN=MLST8 PE=2 SV=1
Q9BVC4Target of rapamycin complex subunit LST8 OS=Homo sapiens OX=9606 GN=MLST8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006106 (this species only) · gene tree & orthology
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020472
all species →		RepeatG-protein beta WD-40 repeatInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR037588
all species →		FamilyTarget of rapamycin complex subunit LST8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19842
all species →		G BETA-LIKE PROTEIN GBLInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0031929
all species →		Biological ProcessTOR signalingInterproscan
GO:0031931
all species →		Cellular ComponentTORC1 complexInterproscan
GO:0031932
all species →		Cellular ComponentTORC2 complexInterproscan
GO:0032956
all species →		Biological Processregulation of actin cytoskeleton organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08266MLST8, GBL; target of rapamycin complex subunit LST8-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP