Gene detail

Detailed information of BRAKERYMEP00000001025.1 in Astreopora myriophthalma

Genomic Location: BLFK01000010.1:2204240...2220474
NR annotation: CAH3156657.1, unnamed protein product [Porites lobata]
Species Astreopora myriophthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q498Z6	Small ribosomal subunit protein uS7m OS=Danio rerio OX=7955 GN=mrps7 PE=2 SV=1
Q6DDY9	Small ribosomal subunit protein uS7m OS=Xenopus laevis OX=8355 GN=mrps7 PE=2 SV=1
Q5ZMU0	Small ribosomal subunit protein uS7m OS=Gallus gallus OX=9031 GN=MRPS7 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004083 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00177 all species →	Ribosomal_S7	Ribosomal protein S7p/S5e	Domain	Interproscan
PF00335 all species →	Tetraspanin	Tetraspanin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036823 all species →	Homologous_superfamily	Small ribosomal subunit protein uS7 domain superfamily	Interproscan
IPR000235 all species →	Family	Small ribosomal subunit protein uS7	Interproscan
IPR023798 all species →	Domain	Small ribosomal subunit protein uS7 domain	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR008952 all species →	Homologous_superfamily	Tetraspanin, EC2 domain superfamily	Interproscan
IPR018499 all species →	Family	Tetraspanin/Peripherin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11205 all species →	RIBOSOMAL PROTEIN S7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000028 all species →	Biological Process	ribosomal small subunit assembly	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000001025.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.