Gene detail

Detailed information of BRAKERYMEP00000001208.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029210022.2, LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 7-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000001208

ATGTCTCTGGCACCCAAGATCTTGGAAGTATCACAGTTTATTCTGCGTAATGACGTTGACCTGGCATGTATTACCGAAACATGGCTTAAAGATCGTATTGCCGACGGTGTAGTACATATCCCTGGCTACTCCATCATTTGCCGAGACAGAGGAGTGATTGAGCATGGCGGGGTCTGTTTGTATATAAAGGACGGATACTCTAAGTATCATGTGACTGACAGGCTCAATTGTTGCGAAGAACACGAAATTCTggaAGAACCCTTCTATGATATTCAATTGAATGTGAAAGGCAAGAAGGACAtttatgaGTCTTTTAAAGAGTATATTGCTGTGGAAACTTTGGACGGTGACAACAAATATGATGCAGGAGAATATGGTCTTCAGGAAGCAAAGAAAGGTGTTATTTTTGCCAAGTTTCCACCAGTCCTTCATCTTCAGTTAATGAGATTTCAGTATGATCCCATAACAGACACAAATGTTAAAATAAATGACAGGTGTGAGTTTATGGAGAAGCTTgatttaaaccagtttcttcAGGATCCTGAAGACCACCTTGGGCATTATACGTTACATGCTGTGCTTGTACATAGTGGGGATAACCATGGTGGGCATTATGTTGTGTATATTAATCCCAGTGGCGATGGAAGGTGGGCCAAGTTTGATGATGACGTTGTATCACTGGCCACCAAAAAAGAAGCAATTGATAATAACTTTGGGGGGTACGAGGATGACATCACAGTAAAGCATTGCACAAATGCCTACATGTTGGTGTACATAAGAGACAGTGAAATGAagtACATTCTAGAGGATGTGGATGAGAGTTCAATTCCTGACACACTTGTGCAAAGATTACAGGAGGAAAAGAGACTTGAAGCAcagagaaggaaagaaagacaaGAGGCACATTTATACATGACTGTAGATGTTGTCACAGAGGATCAATTTGCAGGACACCAAGGACCTGACCTGTTTGACACAgagaaaaccaaaccaaaGAGTTTCAAAGTCCTGAAATCAAAGAAACTTCACGAAGTGTTGGATATCCTGGCAGAAGGTTTGGGGTATCCAGGCAATCAAATCAGACCATGGCCGCTTCAGCCAAGGAGCAATGGAACAACAAGACCCAGCTTGTTAGACACAGAGGGAAACATGGATAAAACGTTGGGGCAGATTGTTGAAGGTAATCAGTGGTTTTTGTTCGTGGAGACAGTTGATCCCGAGGAAGGAAAAGTATCATTACCAATCTTTGATAAAACAAaTGATGTCTTGTTATTCTTCAAACATTATGACCCAACACAGAAGACACTCGCATGTGTGGGCCACCTTTATACACCTCTGTTGACAAAATTTGTTGATGTGCTTCCCATGCTGTGTGAGCGAGCAGGTTTACCTCAGGGAACACCCTTAGCCTTGTTTGAGGAAGTGAAAGCGACTTACGTGGAACAAATTAAAGACTTGAATGCCGCTTTTGAAAGGGGGGTTGAAGAAATCATGGATGGAGACATCATTTGTTTTCAGAGATGCGAGCAGGACGTGTTGAGCACAAGTGAATTACCCACCGTGGCAGATTATTTCAGAGATCTTCACAACAGAgttgaagttttattttgtgacaAGAATATTGCAACTGACCCAGGATTCTGTGTTACTCTTTCGCTTCGAATGAACTACATGCAGGTTGCCAAAGCAGTGTCAGCCCATCTGGAAGTTGATCCCATGATGCTTCAGTTTTTCAAGGGACAGGCATATCGCGATGCCCCAGGGAATGCTCTTCGATGTACGTATGAAGGAACACTGCGTGATCTGTTGATATACTACAAACCGCGAGGACCTAAGAAACTGTACTACCAAGTGCTTAGTATTCCTATTGACCAACTTGAAAACAAGAGACAATTTAAATGTGTTTGGGTAGCCAACCAGTTCAAGGATGAGAGGGAACTTGttctttttccaaacaaagATGGAACAGTGTCAGACCTACTCAACGAGGCTCGAGAGCAAGTGGATTTACATCCTGATGGCACCGGAAAACTTCGGCTTCTAGAGATAATTAGTTCTAAAGTATTCAACATCGTGGGCAATGATGTACCACTCGAGCATCTAACCAGTCAGGCGCAAAGAACATTCAGAATAGAAGAAATTCCCGAAGATGAAATAGAGCTCGGAAAAGATGAACTTTTAGTCCCGGTGGCACATTTCAGTAAGgAAATTTATCAAACATTTGGAAGTCCATTTTTGATCAGAATAACCGACGGAGAATCGATTACTAAGTTAAAAGAAAGGGTAAAGGGAAAAATAGACATTCAAGAAAAAGAATTTGAAAAGGTAAGCTGGACAGCTGTTTCGTGA

Transcript

BRAKERYMET00000001208

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q93009	Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens OX=9606 GN=USP7 PE=1 SV=2
Q6U7I1	Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus OX=9031 GN=USP7 PE=2 SV=1
Q6A4J8	Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus OX=10090 GN=Usp7 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003788 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12436 all species →	USP7_ICP0_bdg	ICP0-binding domain of Ubiquitin-specific protease 7	Family	Interproscan
PF14533 all species →	USP7_C2	Ubiquitin-specific protease C-terminal	Family	Interproscan
PF00443 all species →	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050164 all species →	Family	Ubiquitin carboxyl-terminal hydrolases	Interproscan
IPR024729 all species →	Domain	Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain	Interproscan
IPR028889 all species →	Domain	Ubiquitin specific protease domain	Interproscan
IPR029346 all species →	Domain	Ubiquitin carboxyl-terminal hydrolase, C-terminal	Interproscan
IPR001394 all species →	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR018200 all species →	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24006 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan
GO:0031647 all species →	Biological Process	regulation of protein stability	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000001208.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.