Gene detail

Detailed information of BRAKERYMEP00000001471.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029190998.2, fas-binding factor 1 homolog isoform X2 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000001471

ATGGCTGGAGAAGGgtttgatgatgaagatgaagatgagTCAATTTCAGAAGCAGATGCCAAGAAAATGGCTGACAGCCTGGCTGGTTTAGATGACATGGAATCTGATCTGTTCGGTGGATCCCTGGGTAGGAATGCCACACAGAGCAAACTTTCAAGCCCTTCACACTCAAAGAACAAGACAAAGACTGAAAGAAAATTGTCTGAAGACTCTTCCAAACTGGGAAAGAGCCATAGAGAAAAAAGCAGTTCCCCAGAACCAACCAAGCTAACTGGGGAAATAATGACTTCCGGTGATATGAGGAAAGTCGAGGCAGAACAAGATACTAAAACTACGAAGCCAAAGGGAGCACAAAAACCACGAAAAAAGTTTGATTTTGGAGAGTTTGATGAAGATGATCCCTTGGCTGGCCTGTTGTCTGATGAAGAGGACAATGTCGTTCCAAAACCAAAGCCTAAAAAGTCCACAGCTGCAAGGAAAACTGACTCAGCAGGAATATCCCATCAAGGTTCAGAGGAAGAAAGACCAAAATCCTCTAGAGGACGTCGACAAGCCAATCAGGAGCCTGCAAGTTCTTCCTCACCACCAGCCACGCCTGAGCATCAACCAGCTGTCAGCAATGAGAAGGCTGAAGACATAGGTGCAAGTTCACCTTCTATTTCTCCGAGGACTGCTGGTAAACCAGACGACAGACGTGAGGAGTCAGAATCCCCTCAGGGTACACCTCAAAGcagaggaaaaggaaaatttgCACGGAAGGCAAAGTCAGGCAAAGATGAGGTCAATTTTGATTCAGATGAAGATCTTCCTGGCTTAGATTACTCTATCAAATCTCCAAGAGATTCACCCACCCTGCCCGCCAAAGCCAAAATGGAAGGCACCAGCAGACGGAACAGTCAGGGGTCCTCTGGGGATATCtttggtgatggtgatgatttaCCAGACACAGGGCCACGAAGTGAAAGTCCCTCCAGACAGTCTCGATTCAGTGAGCTTCTTggtaaaaaggaaaaggatcaACCTAAAAAACAAGTTCCTAAGTCGATGGACGACTTTCTGGCCAATATTAGCAGCAAATCAAACACAGGCTTAGGAGCGGGAAGCAAAAAAGtttcgaGTCCCACATCTGAAGACTCCTTTCAGTTTGGCGGCTACATGCCTTCTGCAGCTACTAGTGGTCCGTCACATAGCCGGGGTGGTCTGGCACGACCAGACACAGCCCCCAGCTCCGTTAAACGGTCCGTCAGGTTTTCTGACGAACTTGGGCTCGATGACGACCTGGTTGAAAGCAACAGACCGTCCAGTGCTCCAAGTGAGCGACCCAGCAGAAGACAACAGAGGAGAGGTGACGGAACTGACGGAAATAAGAGTGGATCATTTCTCGGTGATGATAAGAAACCACCGACTGGGAGTGATTCTACTAAAACGCAAACCAAGGAAAACGGTTTAAAATCAAGTGGAGGTGGCGGGGGAGACTGGTTAGGACTTGGTGGTAGTGATGATGGGAGCCTGGATATGAATAATGCTTTGCCAAAGACTAGCACACCACTTCCAAAGGATGAGAAAAAGGATACACCCAATGCGCAAGGTCCAACCGAACGTCAAGAGCGGCAATCGTCACCACCCCGTAGAGCAGGCAGATTCAGAGGAGAGAGCGGCGATAATGACGAGTATCTGCGCATGTTTGGAATCACACCTGATGAACCATCCAAACCAAAACAGCCAGAGGCTTCAGATGGCGGAAAGTCATCATTGTTTCCGTGGGAGTCACCAGCAGGTAGCCCTAGGAGGGGAAGGCGGTGGCGCGACCAAACGTCGCAGCAGAGCTCCCTGGACAAGCCAGATGACGCAACCCTAGAGGGAGGGCCTTTGGATGTGCCTGATAAGACAACTCCTCAGTGGGGTCCCCTGCAAAAAGATGAAGGCAGACAGAAAGGTGTCCAACGGCAAGTGTCATTAAACCAAGACACGGAGAGACCCGAGGCACCTCACCAGACGGTTGATAGACAACATGTTATCAAAAGATCGCCACAGTATCCTGCTCAGGAGGATGCAATCGGGTTATCAACACCAGCCTCAGTTCCACCCCCCGAGTCAAGACCAGTACAAGCTGACGGTCATTATAGAACCCAACCGGTGTCCCCTCATGCTAACATTCCGCCGCAAGTGGGACCTCAGCCATACACCCCACAGTCGCAGTCCACGCCTCCGCAATACCAGCCTACTCCTCTCGCTTCGCAGACAACTCAAAACCCGCCCCAATCTCTTCCCTATCAGCCTCAATACCAGTCCCCAACTGGATTTCAAGCCTCTCCGCAAACCTCTCAGGCGTTGTTTCCGGTCGCTCAACCCTCGCCCCATATTTCCCAACTTTCGGCTGTGGAGAGACTGGAAATGACTAAACTAAAAGCTGAGAGCGAGCTGCAGCAGGGTCGCTTAATGGAATATCAGGTAGCGAGTGAGCACCAGCAACAGCAGAAGACGCGGCTGGAGGAGGAAGTTAAGGAACTGGTGAAGAGGGTTCAGGAGATGGAAGGAGTAAGGCAGAAGAAAGAGTTGGACGCTGCTAGTAAGGTGTCCGAGTTTGAAGGAAAGGTTCGTCGTTTAGAGCTGGAGAGAGAGCAGCTCCTCACTACAATCGAGTCTCTGAAAACAAGACACAAGGATGAATTGGCTAATATCGATATAGCTCAAAAGTCCCACTTGAAGACCTTGGAAGAATCGTACCGGCGTCGGGAACAACGACTAAAGGAGGAAACCGATCTGATCatcaaccaaaacagcgaaaagtTCAAAAACCTGGAAACAGAAAAAGCTGATTTACAAGCGTCGAACAACAGGAAAATCGCTCTTCTAGAGACCGCGAAAAGCAACGAGATAAACTCGTTAAAAGACATTCACCGGCGAGCTCTGGAGCAGTTTCGCCAAGAACATGAAGACGAGATTGCGCAGTTGAGAAGGCTCAAGGAACAGGAGGTGTCAGCGGCTACCAGTGCACATGCGCACACTAAATCCCTCCAGTCCCTCATGGATCAAGTGTTGAACTCCACTCGCGAAGTCAGCAGCTTGCGTCAGAAGATTGAGGTCACGCATAAGAGCGGGCTTGAAGAACGTGAGCTGTCTGCGAGGGCCCGGGATGAGTATCTGAAACAGTTGCAGGAGAGGTTACTAAGGCAGCAGTCTGAGAATGACGATGAGAGAGCCAGGTTACAAGGCAAGTGA

Transcript

BRAKERYMET00000001471

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZIB2	Fas-binding factor 1 homolog OS=Gallus gallus OX=9031 GN=FBF1 PE=2 SV=1
A2A870	Fas-binding factor 1 OS=Mus musculus OX=10090 GN=Fbf1 PE=1 SV=1
Q8TES7	Fas-binding factor 1 OS=Homo sapiens OX=9606 GN=FBF1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002930 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21007 all species →	FBF1	Fas-binding factor 1	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049390 all species →	Domain	Fas-binding factor 1, C-terminal	Interproscan
IPR033561 all species →	Family	Fas-binding factor 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33689 all species →	FAS-BINDING FACTOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0090162 all species →	Biological Process	establishment of epithelial cell polarity	Interproscan
GO:0097539 all species →	Cellular Component	ciliary transition fiber	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16471	FBF1, ALB; Fas-binding factor 1	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.