Gene detail

Detailed information of BRAKERYMEP00000001480.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029190934.2, mitotic spindle assembly checkpoint protein MAD1-like isoform X1 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000001480

ATGAATATACTCAGAACACCGGATGACAGTACAGCTGTCGTAAGAATCATGGGTGAGTTTGATCAGTTTTTGTCGAGTGATCCAAAAAGCCGGCTAACTTACGAAGAAGAAGCTGAGGGCGACGAGACGAAGAAGTTGTCCATTTTGAGCTCTTCTACGCTTAACGCTGTGAAGGCCGGTAGGAGTTTGAGTAAATCAAAAAGCCAAGGTACATTTTTCTTCAAGGAGCGAGAAAAAGACGTGGAACTGATTAAAACGCGGAGCAAATTAGCACAGCTAGAGGGTGAAATGAACATGTTGGAATCCGAGAGAAAACGAGCAAGGATAGAATACGAAAAAGACActggaagccacaaactggagTTTCGGCGATTTCAAGAGAAATACGACGACTTGCAGCAGAATTTTCTCTGCCTTGCAGAGCAAGAGAAAAATGCTAAGGATCAGTTGAAGGAGCTGAAAAGGGAGTTTGAGTCTTACCGCAACAGATCTGagcaaaaaatacaaaacctACAGAGAGAAAAGCTGAAAGCTTGTTCAGAAAGAGATGAGTGTAAAGAAGATACAAGCCAGAAACAGATGCAGTTGAAGAATTCTTTATTCAGACTTGGAACAGAGAAAGCGTCAGTGCAAAACAAGCTGGAGGATACTCAGAGTCAGTTTGAAATTGTTAAAAGAAGACTTAGTGAAGTGATGTCTGAATTATCGGAGCTTGAAGAACTAAGAGAAAGATCAAGCACAGCTGAACACAGAGTCAAAGAACTGGAAGAGAAGATGTCTCGTCAAGAAGAAGCTACTGCGGTTGCCCGGGTGATGCAAACTAAGCTGACAAAGTTCAGGGAGTTAgagaaggaaaatgaaaagcTGAAAGATGAAAATCATTATTACAGGGAGACAAATGAAAGTAACCTTTTGTTGAAAGAGAAAGCTGATAGTTTACAAGGAAAACTTCTGCGAGCTGAGCAGAGGATTACAGAGTTAACAAGGGTTGAGATTGAAAATGAGGAGCTGAAAAAGAAGATTCAAAAGTGGGAAACAGAAGACCTGTCAGGAACAAAGAGGCTCAGaTCCCCAGCCCAACTTGCCCAGGATATCGCAAATCTTCAGAAGAGTCAAGTTGTTTTGCTGGAGACTCAAAATGAGCTGAAATCCGGTGCACAGATTAATGAGAGAGCCTACCAAAGAGCGGCTGAGGAACTGGCAGCTGTCAAAAGGGAGTCGGTGGAACTTAAGGAAACGAGCGATCGGCAGAGAGAACTGAATCAGAGACTCCAACGAAGGCTGTTTCTCGTCACAGCGGAGCGTGATGGTTGTCGCAGAATTCTGGACACTTATGATAACAGCTATTCGTCAAACTACGATCCTCAAATACATTCCAGGTTACAAGAGGCTGAAGCTCGCCTTAAAACATGCCACGATCACATAGAAAAACTGGAGGTTGAGTTGAACCAAAAGGCAGAAATTGCAAGTCAGGAGAGACTAAAGTGTAATAAGTTGGAAGTTGAAGTAAACGAGTTGCGGGATAAAGTCCCTTTGCAGGCTCCAGGGAAGGCTGATAACAGCCTGTTGAGGACTGAGGTAGAAAAACTGAAAGCAGAAAATGCAAAGCTACAGGAGCAACTTGACATTTACGAACTCAGAAAAGAGCAAATGCACATGCAGGGTTACCACGATCCAACCAAATCCAAGATTGTTCACCTGTCCATGAACCCTTCAACTATTGCTAGGCAACAACGGGGAGAAGACCTTGAGAAACTGaggaaggaaaatgaaatgttgagGAAACGACTGCAGGTCCTGGAGGAAGGAGGCTGTGGTGGACTTGGGGATCTCAGCCCGGCTGGAATCAGCAACCTTACCCCTGAAAATGCGCCGAGTGTCGTCAAACAAGTCGAGGACTTCAAGGCACAACTCTCTTCAGCAGAGATGAAAAATCAGCGTCTGAAGGAGGTTTTTAAGAAGAAGATTCAAGAGTTTCGCGAGGCTTGTTACGCGTTAACAGGATACAAAATTGATGTAACGAGAGAGAATCAGTATCGATTGCAATCTATGTACGCTGAAAGATCAACAGATGATCTCGTCTTTGAGAGCAGTAACAAAGGCGAAATGATGCTGTTAGCCACAGACTTCTCCTCACAGTTAACAGATCAAATAGATACGTATCTGAACAGATTCAACTCTATCCCGGCATTCCTGAGCGGCATCACCCTCGAGCTCTTCAACCGACAAACGCAAACTATTGTTATAAACTGA

Transcript

BRAKERYMET00000001480

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y6D9	Mitotic spindle assembly checkpoint protein MAD1 OS=Homo sapiens OX=9606 GN=MAD1L1 PE=1 SV=2
Q9WTX8	Mitotic spindle assembly checkpoint protein MAD1 OS=Mus musculus OX=10090 GN=Mad1l1 PE=1 SV=1
Q80YF0	Mitotic spindle assembly checkpoint protein MAD1 OS=Cricetulus griseus OX=10029 GN=MAD1L1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005177 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05557 all species →	MAD	Mitotic checkpoint protein	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008672 all species →	Family	Spindle assembly checkpoint component Mad1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23168 all species →	MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan
GO:0007094 all species →	Biological Process	mitotic spindle assembly checkpoint signaling	Interproscan
GO:0051315 all species →	Biological Process	attachment of mitotic spindle microtubules to kinetochore	Interproscan
GO:0072686 all species →	Cellular Component	mitotic spindle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06679	MAD1; mitotic spindle assembly checkpoint protein MAD1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.