Gene detail

Detailed information of BRAKERYMEP00000001621.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_020610650.1, uncharacterized protein LOC110049208 [Orbicella faveolata]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000001621

atgaaatcaaCGAATGGAGGTAAGCGGTATCATACTTTAAACCCGGAGCCATCGAGCATGGCAAGCCCAGGAAAAGAATGGCCGAACGTAGAAGGAGCGAAGGAGAGCGGAGCCAGGAGCAAAAGGGAGAGAAGACCCACACAAAAGGCTCTACAAAGCGCGGTAGAACTTAAACGGAGGCAAATTCTCAAATCGCGTAAAAGGCTTCTTAGTGTTATGCAATCAGTAGAAGGGCTAAGTGATGACAGCCATATTGGTACTGTAGCGCGTGACCTTACACTCGCCTCGGAGGAGTTTGGTAGATTGTTGCAGGAGTTAATTGGCTTGTACGAGCAAGATTCACGCGGCGATTACTTAGAAGAGGCTCACCTTAGTGAAGAGAACGAGACCCTCAACCGAGCCCTCTTACTTTTAGACAGTCTAAAGAATAGAATTACTAGACAATCCAACAAATTGTTGGAAACAAAATCTGTGTGTTCTCGTCCTTCCTCGCGCCATTCATCAGCCTCCAAAACGAGCAGCACTGCCGCTAGATTGCAAGCGCTAGCCGAAGCTAAAGCGGCAAGAGAAGAAGCTCAGTACACACGGCTAATAGCGCAAAAGGAACTTGAGCGCAGGACACGCGAAGCGGAAGCACAGAAAATTCGACAACAGGAGATAGCGCAATTCGAAAGGGAGATCGCGATTCTAGGAGCAGACAAAAAGGCGGCGATGGCGAACGCTAAACTTAAAGTTTTCGAGGAGGCTATTCTAGAAGAAGAACTTGAAAGAGATTTTAAATTACAAGAGTTAGAAGTTCCCAAAATTAAAGCAGAGGAGAGAACTTCCCAGTGGGTACATTCCAACCCCCCAACCACGGGAAAGGTATCACGTTCCGAGCTAAATCACGAGCCGTTAAGCACGCCAAGACAAATGATGCTTTCATCGCGCCCCACccccaaagaaagaaaatcggAGAAAACAGACCTCCCCCCTGAACTTCATGTCCAAAACCCGGATCTACCTCAGCAGCAATCCACAGATGAGGATTGTGTAGTGCCGCAAAATACCATTTTCAATCGGCAACCACTTATATCTTCGACCCCTTTGAAAGATATCACCGGAAGTCAACTGATAGATTCGCTTACAGTCGCAAATCAACAGATAGTTGCCGGCCTAGCGAGACAAAATCTCCCAAAATGCCAGCCCGACATATTCTCTGGAGACCCTACCCTCTTCCATCCCTGGAAAACCGCCTTCGAAGCTATGCTGTTAGACGCTGACGTATCCCCAACTCAGGAGATAAACTATTTAAGAAGCTTCACTAGCGGGAGGCCACAACGCTTAGTTGATAACTACCGGAAGCGGCAAATGCGCGACCCCGTTGCGTTACTAAAGGAGCTGTGGGATGAACTAGAAAGGCGTTTCGGGAGCGTCGCCGTGATCAGTAATACATTGTTGGAGCGATTACGGGACGCGGCGACTTTTGGTGAGCGAGAACACGATAATCTGCAGCTGTTCGCAGATCTTTGCGCGGATATCGAAAGTCAAGTGACTTATCTTCCCGGACTCGCGTGCCTAAACTATCCTAATGCCATGCAACCAATAACCGAGAAGTTGCCGCGGTTTATCCGCGCCAAATGGGAGAAAGAAATAGCCTGTTACTCGAACAGCAACGGCGGAGCGTATCCCCCCTTCTCCACGTTCTCTAAAATAGTCCAGGAGCAATCAAAGATAAAGAACGATCCAAACGTTCTAGCCGGTAAAGCTGCCAGCCCCGCCCAGGCTTCGACACCTAAACCacgcaaagaaaacagaacgCTTAAAACGGAGACTCAGCCCACAGCTGGGAAGGACGGTGCCggagaggaaaagagagaggcCCCTGAAAAAAGAGAATATAAGACTAAACATTGCCCGTATCACGAAAAAGACGGACACGATCTGCAGGAGTGTAAAGCGTTCACAGCGAAACCCCTGGAAGAACGTACGGAGTGGATTAAAGACGCCCGCCTATGCTTTCGCTGTTTCAGCCCCTACCACGTCGCGAGTCGGTGTAACGCCTCGGTACAGTGCGGTATCTGCGGAGACAAGCGCCACAGCGCCGTATTGCATAAGGAGAAGCGGCCACCCTCTAAACCGGAGAATGAAACGGTCAACCCAAAATGTACCGTGCTCTGTGGACCTACAGGGAGCGTGTCCTGCAGCAAAACTCTGCTGGTGGACGTCTATAGCCGGCGCAACCCACACTTCGCTAAGCGCGTCTATGCTATCGTTGATGAGCAGAGCAACGGTTCCCTCGTCACTAGTGAACTAGCCGACGACCTTGGAGCGGACGGACCCTTAGAAAAATACTTCTTGTCCACGTGCAGCGGCGAGAAAGAGGAGAAGTATGGTCGAAGGGTGGCAGGCATTACGGTACGTTCACTTAGTGGGGCAGAGTTCGCCGCGCCGACCCTCACCGAGTGCGATACCATCCCACAAGACAAGAGCGAAATCCCTACCCCAGACATGGCAAGGAGTTTCCCACACCTAAAAGCCATAGCGCACGAAATACCTCCCATAAACGAGACAGCTAAGGTTCACCTCCTACTCGGCCGGGACGCGCCGGAGCTTTTAAAAGTCAGGGAGTTCAGAAATGGCCCGAAAGGAGCCCCCTGGGCTCAGCGACTGGCCCTCGGCTGGACCATCAGTGGTCAGATGTGCCTTGACTTCGCCAGTGGTCCCGCACACGTCCTCACTCGCCTCACCAGCCTATCCACTGTTACGGCGAAAGAACCTGAGACCGGAAGCAGAATTTACGAGCTGGTACCTTGCCCCAACCAGATCAAGGTTACAGACCCCCTCTTAGAGCGTGCCACTGACGATGTATTTAGGAAGACGCGAGATGACAACGAGCCCGGTCTCTCCTGCGAGGACCGTAAGTTTCTGGAGATACTGGATAGGGGTATACACAAGAACGCAAAGGGAAACTGGGAGATGCCCTTACCGTTCCGTAACGAGCGCCAGACTATGCCGAACAATCGAGGTCAAGCAATGCAGCGCTTACAAGGGCTACTCAAGACATTTGCCAGGAAACCCGAAATGAGAGCGGACTATCTGGAGTTTATGGGAAAAATAATCGACAAAGGCCACGCCTCGGCTATCCCAAGTAAAGAAGTCCCGCCCCCTCCCGGCCGTTCCTGGTACTTACCGCATTTCGCGACTTATCACAATACAAAGCGCACCATTCGCGTCGTATTCGATTCCAGTTGCGAGTTTGGAGGAATTTCATTGAACAAAGTACTTTTATCGGGTCCCGACCTGATGAACAACCTCATCGGAGTCCTCATGCGCTTTCGCAAGGAGAAGATAGCAGTAATGTGCGACATCGAGCAAATGTTTCATTCGTTCTATGTTGATCCACCGCATAGAGACTTCCTTCGTTTCCTATGGTTCGAGAGTAACGATCCGTCAAAGCCCATTATAGAATATCGGATGAATGTACACCTGTTTGGCAATGGACCTAGTCCCGCAGTCGCTACCTACGGCCTACGCAGAACAGCCATTGACGGCGAGGAGGAGTATGGCGAGGAGGCCAAGAAGTTCATCTGCCGTAACTTCTACGTCGATGATGGTTTGACCTCGCTTTCATCTACTCAAGGAGCGACAGACCTGGTTAAGAGTGCGCAAGCCACCCTAGCCACGGCCAACCTTCGACTTCACAAAGTAGTTTCTAACTCTGTGGAAGTCATGGAAGCCTTCCCGGCCGAAGACCGAGCGAAAGACGTGCGCGACCTGGATTTACGCCACGACAGCTTGCCAGCTCAACGCTCGCTCGGGGTATTCTGGGACCTGGAGACAGATGCCTTCACCTTTAAGGTATCCTTGCCGGAGAAGCCATTCACAAGGAGAGGGGTATTGTCCATCGTCAACTCTGTGTACGACCCGCTCGGCTTTGCAGTACCTGTGATGCTCGAAGGGAGAAAGATACTACAGCAGCTCGTCCATATGGGAGAACGGACAAAGGAGAACAATACCCCCCTAGCCTGGGACGACCCCCTCCCTACCGCGATGAAAAATCGCTGGACGCGTTGGAGAGACTCTCTCGTGGAGTTGCAGAACCTTTCCGTGCCTCGCTGTTACCGCCCTAAAGATTTCGGCAGCGTGGCAAGAGCGGAGCTACACGCCTTTTCCGACGCAAGTCAGGACGCTATTGGAGCCGCAGTCTACCTTCGCCAGTTCAACGAAGCAAACGAGGTGACTATGGCTCTCGTCTACGGCCAAGCAAGAGTCGCCCCGTTGAACCCGACGAGTATACCGCGTCTAGAACTGTGCGGAGCGGTCTTAGCTGTTCAAGCAGCCCAGAGAGTTATAAAAGAGATTGATCTGAAGATTTCCGACGTGACATACTACACCGATTCGAAAGTGGTACTTGGCTACGTTACCAACGAGAGTCGACGGTTCTATGTGTACGTAGCCAACCGAGTCGAGCTGATTAGGAGCATGTCTACCCCGGAACAGTGGAGATATGTGGAGACTGATTTGAACCCGGCAGACCTAGCAACGCGCGGAGTTCCCTCAAGCAAGCTAACGGAGACGAACTGGCTAGTTGGCCCGGAATTCCTACGCAAACCAGAGAGAACCCTCCCAACCAATGAAACGTTCGCGCTCGGCGCAAGCGACCCTGAAGTGCGAAAAGCAGTGTTCAGTGCTAGTGTAAATACGCACGAAGAGGAAGAGCCAGACCTTGGAACAGGGAGGTTCAAGAAATTTTCTTCATTAAAGTCTCTGCAGCGAGCAGTCGCTAACCTTATCGTCATTGTCAAAAAATTCAAACACCGGAGAGACGTCAAAGCAGAAAGAGTCGACCTCAGGAGCGAAGCGCGTAATACACAAGACAAACTCAGACCCCCGACGGTGGAGGAATGGGACCAAGCCCTACGCGTCATAATCAGCTGCACGCAGAGGGAAGCGTTCAGCGGACTGTTAAGCGACACCAGAAAAGAACCCGAGCTACCGAGAGAAGCCCAAAGTAGCGCCAAGAAGGCTCTCAAAGGCTCGCAGCTGTACCGTCTCGATCCCTTTCTAGACGGCCACGGGATCCTCCGCGTCGGAGGCAGATTAAGGAGAGCTCGGATGGAGTATAATGAGAAACACCCGATTGTACTACCAAAGTGTCACTATGTCTCACAGCTGATAGCTAAACACTATCATCATGAAGTACACCACCAAGGGAGACAGATTACAGGGGGTGCAATTAGACAAGCAGGTTTCTGGCTTATCGGAGGCCACGACGTAGTCACGAAGGTCATCGGAGCCTGCGTCCTTTGTAAGAAGCTGAGAGGACCACACCTGGAACAGCGTATGGCCGACCTCCCGCTAGATAGAACCGAAGTCTGTCCCCCCTTTACCAACGTAGGATTTGATGTCTTTGGGCCCTGGGCGGTGCAAACACGTAAGACCAGAGGAGGAGGGGTAAACGCCAAGCGTTGGGGCCTAGTGTTCACGTGCCTGAGCAGCAGAGCCATCCACATCGAGATCTTAGAAGCTATGGACTCCAGCGCCTTTATCTGTGGATTGAGGAGGTTCTTCGCACTACGAGGTCATGCTAAACTCCTCAGATGCGATCGGGGAACAAATTTCGTTGGAGCTAAGGCGGAGCTTGAAGCAGCAGCATCCGAGTTGGATGAGAAGAAGGTGGAGAAGTTCGTAACGGAGTGCGGTTGCAAGTGGGAGTTTAACCCTCCCCATGCATCACATTTTGGCGGTGTGTGGGAGAGGCAGATTAATACGATTCGCCGCGTATTAGATGCTATGTTCACTGAGTTAGGTCAGAGTCAGCTTACACACGAATTGCTGGTGACTCTGATGGCCGAAGTTGTAGCCATTGTGAACGCCAGGCCGATAGCAGCGCTGCCGTCCGACACAGATGACCCGCAGCCTCTGTCCCCTGCGATGTTACTCACTATGAAGACACGTCCGCCCGGACCCCCTCCAGGCCAGTTCATGCGGACAGATATCTACGCGCGCCGTCGATGGAGACGAGTCCAGTTCCTTGCGGAACAATTTTGGACCAGGTGGAGGAGAGAGTACTTGCAGAACCTACAGCCGCGACAAAAGTGGATGGAGACGCGGCGAGACCTGTGCGTAGGAGATATCGTTCTTGTGCGAGACGAATCACGACACCGTAATGATTGGCCACTGGGACGAGTGTCGGAAGTCCTGAGGAGCGATGACGGCAGAGTGAGGAAAGTCAAAGTAAACGTTGTCAGAGACGGAGAAAGGAAAACCTACCTTAGACCAATAAAGGAGCTGGTTCTACTCCTGACTGACACAGCTGATCCAGACCAGCAGGTGTTGCTAGACACAAAGGATTTCTGCTTCAGTACATTTGAACCATTATCATCTAAAGACCTCCAAAAGAATTTGTATGAGGGACTTCTTACCAGTGATGCAAAAGAGAAGTTGGCACAGCAGACTAATTTGAGTGCCAAGTTTGATTCTGGATTACTAACTGCAAAAGCATTGGAGAAGTATAAGAACAAGATATACCTTGCATATTACCCACCATCACCTCCAGtaacaAAGCTTATGGGAAGAGTTCAGAATATCACCCTTGTGACATTGGCTTCTAGAAGCATTATTCACAACAGAAGTTGGTCATCAGCTGACGAAATGGCTGACGAAGCATCACAGCATGAAGAATACTTGGGAGCTATCCACTTTGCCATTAATGAAGGTGCTACAGAACTTCCCAAGCAAGTTAAGTACAGCCTCCGAGTTCCCCATGAAGTGGCAGGCAGTCAAAAACGGTGGAGGACAGAAAATACATACCCAAACTTTCAGGCTGTGGGACCAAGAATCGAgGGTTGTTGTGATGGCTACAAGTCACGATTTGTGCTGTTGCAGTATGCAATTGATATGGCAATCATTTCAGAGCATTCTAATGTAACTCGAGCAATACCACTTAACCTACAGCAATTCCCATATCCAAAGTACACTGAGAATATCTTCATACTGACAGTGCAGGGATTGATGCCTCTCCTAGGGACCTTAGCATTCATGTACTCTGCAGTTATGATTATCAAGGAACTTGTTCATGAGAAACACAACCGCTTAAAGGAGTCAATGAAAATGATGGGATTGGCTAACTGGATTCACTGGTGTGCATGGTTCACTAAAAACTTATTGTTTCTGCTTATCTCCATCATCATAACCACAGCTCTTCTGAAAGGTGCAAAGATCTTTGAGTTCTCAGATGGCACTGTTCTTTTTGTGTTTCTTCTGCTGTATATCATAGCAAGCattatgttctgttttgctATAAGCTCATTTTTCTCAAGGCCAGTTGTGGCTATGTTGTTTGGTGCAGTAGCCTGGTACTGTACATTTGTTCCATACCAGACATTCGCCCAACAGGAAGCATATGAAGCATTGACAAGGTATCAGGAGTTTTAA

Transcript

BRAKERYMET00000001621

Protein

BRAKERYMEP00000001621.1

MKSTNGGKRYHTLNPEPSSMASPGKEWPNVEGAKESGARSKRERRPTQKALQSAVELKRRQILKSRKRLLSVMQSVEGLSDDSHIGTVARDLTLASEEFGRLLQELIGLYEQDSRGDYLEEAHLSEENETLNRALLLLDSLKNRITRQSNKLLETKSVCSRPSSRHSSASKTSSTAARLQALAEAKAAREEAQYTRLIAQKELERRTREAEAQKIRQQEIAQFEREIAILGADKKAAMANAKLKVFEEAILEEELERDFKLQELEVPKIKAEERTSQWVHSNPPTTGKVSRSELNHEPLSTPRQMMLSSRPTPKERKSEKTDLPPELHVQNPDLPQQQSTDEDCVVPQNTIFNRQPLISSTPLKDITGSQLIDSLTVANQQIVAGLARQNLPKCQPDIFSGDPTLFHPWKTAFEAMLLDADVSPTQEINYLRSFTSGRPQRLVDNYRKRQMRDPVALLKELWDELERRFGSVAVISNTLLERLRDAATFGEREHDNLQLFADLCADIESQVTYLPGLACLNYPNAMQPITEKLPRFIRAKWEKEIACYSNSNGGAYPPFSTFSKIVQEQSKIKNDPNVLAGKAASPAQASTPKPRKENRTLKTETQPTAGKDGAGEEKREAPEKREYKTKHCPYHEKDGHDLQECKAFTAKPLEERTEWIKDARLCFRCFSPYHVASRCNASVQCGICGDKRHSAVLHKEKRPPSKPENETVNPKCTVLCGPTGSVSCSKTLLVDVYSRRNPHFAKRVYAIVDEQSNGSLVTSELADDLGADGPLEKYFLSTCSGEKEEKYGRRVAGITVRSLSGAEFAAPTLTECDTIPQDKSEIPTPDMARSFPHLKAIAHEIPPINETAKVHLLLGRDAPELLKVREFRNGPKGAPWAQRLALGWTISGQMCLDFASGPAHVLTRLTSLSTVTAKEPETGSRIYELVPCPNQIKVTDPLLERATDDVFRKTRDDNEPGLSCEDRKFLEILDRGIHKNAKGNWEMPLPFRNERQTMPNNRGQAMQRLQGLLKTFARKPEMRADYLEFMGKIIDKGHASAIPSKEVPPPPGRSWYLPHFATYHNTKRTIRVVFDSSCEFGGISLNKVLLSGPDLMNNLIGVLMRFRKEKIAVMCDIEQMFHSFYVDPPHRDFLRFLWFESNDPSKPIIEYRMNVHLFGNGPSPAVATYGLRRTAIDGEEEYGEEAKKFICRNFYVDDGLTSLSSTQGATDLVKSAQATLATANLRLHKVVSNSVEVMEAFPAEDRAKDVRDLDLRHDSLPAQRSLGVFWDLETDAFTFKVSLPEKPFTRRGVLSIVNSVYDPLGFAVPVMLEGRKILQQLVHMGERTKENNTPLAWDDPLPTAMKNRWTRWRDSLVELQNLSVPRCYRPKDFGSVARAELHAFSDASQDAIGAAVYLRQFNEANEVTMALVYGQARVAPLNPTSIPRLELCGAVLAVQAAQRVIKEIDLKISDVTYYTDSKVVLGYVTNESRRFYVYVANRVELIRSMSTPEQWRYVETDLNPADLATRGVPSSKLTETNWLVGPEFLRKPERTLPTNETFALGASDPEVRKAVFSASVNTHEEEEPDLGTGRFKKFSSLKSLQRAVANLIVIVKKFKHRRDVKAERVDLRSEARNTQDKLRPPTVEEWDQALRVIISCTQREAFSGLLSDTRKEPELPREAQSSAKKALKGSQLYRLDPFLDGHGILRVGGRLRRARMEYNEKHPIVLPKCHYVSQLIAKHYHHEVHHQGRQITGGAIRQAGFWLIGGHDVVTKVIGACVLCKKLRGPHLEQRMADLPLDRTEVCPPFTNVGFDVFGPWAVQTRKTRGGGVNAKRWGLVFTCLSSRAIHIEILEAMDSSAFICGLRRFFALRGHAKLLRCDRGTNFVGAKAELEAAASELDEKKVEKFVTECGCKWEFNPPHASHFGGVWERQINTIRRVLDAMFTELGQSQLTHELLVTLMAEVVAIVNARPIAALPSDTDDPQPLSPAMLLTMKTRPPGPPPGQFMRTDIYARRRWRRVQFLAEQFWTRWRREYLQNLQPRQKWMETRRDLCVGDIVLVRDESRHRNDWPLGRVSEVLRSDDGRVRKVKVNVVRDGERKTYLRPIKELVLLLTDTADPDQQVLLDTKDFCFSTFEPLSSKDLQKNLYEGLLTSDAKEKLAQQTNLSAKFDSGLLTAKALEKYKNKIYLAYYPPSPPVTKLMGRVQNITLVTLASRSIIHNRSWSSADEMADEASQHEEYLGAIHFAINEGATELPKQVKYSLRVPHEVAGSQKRWRTENTYPNFQAVGPRIEGCCDGYKSRFVLLQYAIDMAIISEHSNVTRAIPLNLQQFPYPKYTENIFILTVQGLMPLLGTLAFMYSAVMIIKELVHEKHNRLKESMKMMGLANWIHWCAWFTKNLLFLLISIIITTALLKGAKIFEFSDGTVLFVFLLLYIIASIMFCFAISSFFSRPVVAMLFGAVAWYCTFVPYQTFAQQEAYEALTRYQEF

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O95477	Phospholipid-transporting ATPase ABCA1 OS=Homo sapiens OX=9606 GN=ABCA1 PE=1 SV=3
P41233	Phospholipid-transporting ATPase ABCA1 OS=Mus musculus OX=10090 GN=Abca1 PE=1 SV=4
Q9ESR9	ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus OX=10116 GN=Abca2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000000 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12698 all species →	ABC2_membrane_3	ABC-2 family transporter protein	Family	Interproscan
PF18701 all species →	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF05380 all species →	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR013525 all species →	Domain	ABC-2 type transporter, transmembrane domain	Interproscan
IPR040676 all species →	Domain	Domain of unknown function DUF5641	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR008042 all species →	Family	Retrotransposon, Pao	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955 all species →	RETROTRANSPOSON	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000001621.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.