Gene detail

Detailed information of BRAKERYMEP00000001844.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029197541.2, RNA exonuclease 1 homolog [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8N1G1	RNA exonuclease 1 homolog OS=Homo sapiens OX=9606 GN=REXO1 PE=1 SV=3
Q7TT28	RNA exonuclease 1 homolog OS=Mus musculus OX=10090 GN=Rexo1 PE=1 SV=1
Q8IX06	Putative exonuclease GOR OS=Homo sapiens OX=9606 GN=REXO1L1P PE=5 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003353 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15870 all species →	EloA-BP1	ElonginA binding-protein 1	Family	Interproscan
PF00929 all species →	RNase_T	Exonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031736 all species →	Domain	RNA exonuclease 1 homolog-like domain	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR047021 all species →	Family	RNA exonuclease REXO1/REXO3/REXO4-like	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013520 all species →	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR034922 all species →	Domain	RNA exonuclease 1-like, exonuclease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12801 all species →	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004527 all species →	Molecular Function	exonuclease activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000001844.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.