Gene detail

Detailed information of BRAKERYMEP00000003089.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029212409.2, LOW QUALITY PROTEIN: FH1/FH2 domain-containing protein 3-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000003089

ATGGCTCTTATTGACCACATGCAAAAGGTGTCTGAAGCATTCCTCCTTAAACACCCGGATGGCTTAATTGTTATCAATGGCGATTTCAATCCTACCACAACAGGCATATCTGAACGATCAATCAAGCTTAGAACCGGGCTCAGTCAAATAACGAAGGTTTTGACAAGGGATACTGGAACTTTAGATTGGTGCCTCACCAACAAACCCAAGCTTTTCCGCGATCCCGAGAAGTTACCAAAGATTGGCAGGAGCGATCATTACACTGTTCTTATCAAGCCATCTCTTGGATATTTTTGGTTGAATGTTTTTGTGTGTCAACTTTTTGCTGCAAAGGAAATATGGCACGTTTTATTACACGCATCCAGGGAGCGCCGTGCTGCCAGACGAGCTGCTAAAGCAGTAGCAGACTCTGAAGCAGAAGAGACCGGAAGGAGTGAGAAGAGTAGGCAGAGGGCTGATAGTAAAAGCAATAGCAGTGAGAGAGCTCACTTGGAGGTGTCTGCACCAATCAGCGAAGGACCCCACTCATCACCACACCCTTCACCTAGGGGCTCACCAAGGGCTTCACCCACACTTCAATGGAGAAAGTTCAAGGTTGAGGAACCAAAGACAGAGAAACAATCGAACCACAGAAGATCAAAAGGAAATCAAGAGGAACAATCACGACTACTTGAAGAGGCTAGCAGACATTCAAGAGCTGAAGGCTGTAAGCATAACAATAAAGAGGAGCAGCAGTTACCAAGGAGAAAAGAAGTGAATGGAACAGGAACAAGTACAAAAAAGACTCCAGAACTTAAAAGGGAAGAAAGAGAACCTTTGATTAATAATACAGACCAAAATGGGTCTTCTGGTCATAGGACTAGCGATGATAGTACAGACACTGATGACAAACTAGGCTCAAGTACGGACGATTTATTAAATGATGACAATACTGCAGGTGAACGAATTTTGGAAGGAAACTCAAAACTTCCCGTGGACAGAAGAGCTAGTTCAACTGGCTTGCCTTATGATGCTCGGCGTGCTAGTGTTGTAGAAACATCTGAAAAACGTTCAAGTATTTGTGAAGGGTTTCCAGGCTTTCCCAACAAGAAAATGATGTTATCCATGTTGTACGGACAGCAGAAATCATTAGAGGATGTCGACCGTAAAGTTAGTGATTCAAGTTTTTCAGTAGGTGATTCGGTTTATGATAGAAAGCATCAGTTGTTTTCTTCTAGTGAAAATGATGATGGAATCCAGAGGCAAACCCAGAGACTGGAGGTTGAACATTTAGTTTCTGAAGCTGTCAAAAGATTGAGTGGGTGCCCTGAGCTTGATGAAGAGAGTGAAGCATCAAGTGCCCCAGAAGGTAACTTTGAAGGACtgttaaataaagcaaaatCCAATCTAATGAAAGAGGCACAGGATGATAAACCATGCCCAAGTGCAGAGGAGGAGGCTAGAAAACAAGGGGAACTGCGCAAGAAACAGGAAGAAGAACGCCGAAAACAAGAAGAGGAAGCAGCAAGGAAGGCAGCAGAGGAAGCTGCTCTGCTGAAGGAGCTGGAATGGGAAAGAATGATTGTAATGAAGCGAAAACTCATCGTAAACGACTTTAATTTCACTGAGTTAGAAAATGACGAAGATGAATTGCTGGATTCTGCTGCGGCAGGAGCTGGTGAAACAGATACACATTTTCACGCAGAAGATTCAGTGCTTGTAGTTccacctccccctccccctgtaCCAGGGGGCCCACCTCCTCCCCCTCCACCCCCTGGTGGTCcagcaccccctccccctccgtcTGGACAACCAAGGATGCCTGTTGTGAATGACACTAATCCCAAGAAAAAGTTAGTGCGTTTGTTTTGGCAAGAAGTTAAGAACTCACCGCTAATAAATGGTGTAAACAAGACAATCTGGGGGAGTATTGATACTGTAGATATTGATACCAAGAAGTTGGAACACTTGTTTGAGAACAAGACAGTGTCAAAAGTTAAGAAAACTGATGGAGATGAAAAAGATAAGAAGAAGGAGATAGTTGTTCTTGAAATGAAGCGGTCTCAAGCAATCAACATTGGTTTAACAAAGTTACCACCAATCAGGGCTTTGAAGCAGGCGGTACTGAACATGGACAGTGCAGTGATTGACAGAGAGGGGATTGATGTAAGTGAGATGGAATCAAAATGA

Transcript

BRAKERYMET00000003089

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q76LL6	FH1/FH2 domain-containing protein 3 OS=Mus musculus OX=10090 GN=Fhod3 PE=1 SV=1
Q2V2M9	FH1/FH2 domain-containing protein 3 OS=Homo sapiens OX=9606 GN=FHOD3 PE=1 SV=2
Q9Y613	FH1/FH2 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=FHOD1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003657 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02181 all species →	FH2	Formin Homology 2 Domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015425 all species →	Domain	Formin, FH2 domain	Interproscan
IPR042201 all species →	Homologous_superfamily	Formin, FH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45920 all species →	FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0030866 all species →	Biological Process	cortical actin cytoskeleton organization	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12875	ACIN1, ACINUS; apoptotic chromatin condensation inducer in the nucleus	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.