Detailed information of BRAKERYMEP00000003437.1 in Astreopora myriophthalma

Genomic Location: BLFK01000096.1:1158888...1162734
NR annotation: XP_029187252.2, poly(A) RNA polymerase GLD2-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0VFA3Poly(A) RNA polymerase GLD2 OS=Xenopus tropicalis OX=8364 GN=tent2 PE=2 SV=1
Q6DFA8Poly(A) RNA polymerase GLD2-B OS=Xenopus laevis OX=8355 GN=tent2-b PE=1 SV=1
Q641A1Poly(A) RNA polymerase GLD2-A OS=Xenopus laevis OX=8355 GN=tent2-a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001342 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03828
all species →		PAP_assocCid1 family poly A polymeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043519
all species →		Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR002058
all species →		DomainPAP/25A-associatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12271
all species →		POLY A POLYMERASE CID PAP -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016779
all species →		Molecular Functionnucleotidyltransferase activityInterproscan
GO:0031123
all species →		Biological ProcessRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14079PAPD4, GLD2; poly(A) RNA polymerase GLD2EC:2.7.7.19
Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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