Gene detail

Detailed information of BRAKERYMEP00000003485.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029196675.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114961949 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000003485

ATGCCTTCGTTTCTGGATGAAGTTCGAGTTTTGCGCTCAATCGAGGTCATTGTGATATTTTTGACAGCAGTTCATGTTGGGGAATTTCAGGCGGAAAATTTACTCTACGGTTCACGGCTGGGGACGTTTCCAAAGCCGGATTTCAGGACTAATTTCACGTTGAAATCAAATCAAGGCTCAAACTCCTTTAAGCAAATCAGGCATGGGCTAAATGTGGATCCATTTTACGTTCGCGTTTACGCGAAGCCCCTCGAGGGACAAAACAAGGATTTTTGCTTCAATGGAATAGGATCCAGCCAATCGTCTCCTTCCAAGAGTTCGTATGGTGGGGTCATTTTTGCTTACAACTCGGAGTTTGTTCGCGTGTGGGCACCTACACATCCAAATGGCCACATAGTATTCGTCAAAAGTGGATGGGGAGGCGAGCTTAACCCCCAAGAATCCGACGAGGCCGAGGTTGTCGTAGAGATATGGAAGGATGGCCCGGCGCCAACGTTTCAAATCGATCACGTTATCGACACCACGATGCACATATCAAGCCAAACGTACCACAAGGTTGATCATGAATTGAGACAGTTACCCGAAAGGGTCGTAGTTAAACTCTCTCCGCTTGAAACCAATGAAAGAGATGAAACGAATCCAAACAACGGATTTTGGTTTCCTGCTGTTGCGGCCTCTCAGAATCCCAACCCTAGTAGTAACTTTGGAGGGGTGATATTTGCGTACAATGAGAGATATGTGcgtttatgggctcctgatggAGACAACAATAACACTGGTTGCATTTTCATAGGTCAAGAGTGGGGTGGTGGGCACTTCACTCAGAGAGCTTCAAAATGTAGGGTAGAGATTTTACTGTGGGTCAACCAGCTTCCGGTGCCAACTTTTCAATCTAAATGGATTGAATTCAGTGGACAAAGGGACAAAAAATCATTCGAAGAAATTGGTTTTGGAGATGACCGGTTGCCAGCGCATGTCCTTGTTCAACTCCGAGCTGTGGATGGAAGAAACATTGGCTATGTTTTTGAGGCACAAGGAGCCACTCAGTCAGATGACAGTGGTACAAATGAATATGGGGGTGTTGTGTTTGCATATAATGAGAACACAGTGCGTATTTGGGCACCTAGCAGGAGCAGTGGATCCAAAAAGGGATATCCTCTCCTTGTGAAAAGTGGTTGGGGCTATGGCTTCAATTTGCAGGATGGAAGTGACGACGTTCATGTTAGAGTTCTTGTTTATTCCAGCAAGTGCAATAGCTCCTCTGAAGTCCTTTATGAGGGTAACAACTGTGTCACCACACTTTATGACTCTTACAAGATGCTTACATCACAGTGGTCTGAGTGCTCCAGTATATGCGAGAATGGAACGCAGAGCAGGTCATTAACAGGTTGTGATGCAGTTTTAAGAAAGACTTTTCTTTCATGTGATTTTGACGACGGTTCTCATTTGTGTGGCTGGACCAACAAGCGCACTGGAGGCAGCTTATGGGTGACATCTAATACCTCTACTCCCGAGCCGAACACAGGACCGTTGTGGGGACATCCTATGGGCTCTTACTATGCTTACACCAACACGACTACTGCTACACCAGATGAGGAAGTCACACTGACCAGTCCAAACACTCGTGGATGTGAGAAATGCCACTTGCGGTTTTCTTGGAACATGTTTGGTGGTGATGTGGGAACACTAAAAGTGATGGTCAACACAAAAAATCCTTTGTTGGGCCCTAATGGAAGATGGGAAGATTCAGAATGGAAGATGGAAGGGTCCCAAGGAGACATTTTTTGGAGAGCTGCTTTTGTAAACCTGGAGAAGTTTGGAAAGGTGTATCAGGTCCGATTTGTGCATGTGTTGCCAAAAACAGACTGTGGACAGAATGAACCATGCACCACTTGCAAGTCCCAAAAATGTGCCGCAGCTAATGTTGCCATTAGTGGCATCAAGTTGGACTGCCACCAGAACATCGGCAAACAAGTTCCTTTGAACATGTGCAAGACAAGAGAAGTGCCACTCTCTGGATGTGAAATTTCAGCTGATAAACCATTTGAGAAAGGTCCTGCATATAGTACCGAGAAAATTGGTTCAGAAAAATATGTGAAAGCTGTTGGTTCCTATGGTGACATAATAGCCAAGTACGAGTTTAAGGTGGTGTTTACCGCTAGTTATGTAGTATGGAAGCGAACATTTGCCACGTCGAACCTTACCAATGATATCTCGTTCAAAATTAACAGTGGGGATTGGTATAGGTGGCGTCCCCCTCACAAAGGTTCTCATGGTTTGTGGACTGAATACTACTATCAGaattttacatTGAGGCCAGGAATACACACGATCACCCTCAGTCAAGAAGAGTATGGTTTCCGTATTTCTAAGCTAGCTATTGTTCCAGCAGAGATATCTATGTGGACAGACTTAGGAATGCAAAGTCGTCTCATTCCAGACAGCTTTTTATCTGCCAACCCTCATTCAAATCCACCACCAAGATTTGGGCGACTTTTTGCAAAGGATGCTTGGTGCTCATCAGACCACAACCAAAAATATGTGTACTTTCAAGTTCGTCTTCCTCAGCTGGCCTTAGTCTCTGGGATATCAATCCAAGGTGGCAAAGACATCCTGCAGAAGATGAATGATTACTGGATTACATCTTTCAGATTGAAGGTTTCTCTAAATGGTGAGGAGTACACTTGGTACAGAGATTCACATGGACGCCGCACATTCAAGGGCAATACAGATGCCTCAAATGTTAATCACCACAAATTGGAGTTTGCTGCTCCTGCACGTGCGATAAGAATCTATCCATGGCATTGGAAAAACTGGATCTGCCTGCGTGTTGAACTGTATGGATTTTATTTAAGCAGCGAAATGTGCTCTTTCTCTGGCCACTCTCGGACAAGTCAAACATGTGTTGGAGACAGAAACTGTGGACAAAATGCTGGCTGTGTTAAAGAAACACAAAGATTGAGAATTCAAAAGCAAGTCATAGATGGTTACAGTGATGGTGTACTGAAGAACAGAAGCGGTGAATCGTGTCACTGTCACCAAGGTTACCACGGCCCAAGCTGTGAACACTTCGGTTGTTCCTCAAATCCTTGTCACAATTTTGGCCAGTGCTCAGAGGTCAACAATACGTTTACCTGTACCTGTCAACCTGGCTACCACGGTTCCTTGTGTCAGAACATTTGCGAGTCTGGTTTCTATGGCTTCAATTGTAGTGGGAAATGCAAGTGCACAGAACATGGCAGCTGCGATATTGCCACTGGTCACTGCAACTGCAAACAGGGTTTCCGTGGCAAGTACTGTGAACAAGTTTGCAGCCCCGGTTACTTTGGCTCCTACTGTTCTCAGAGATGTCAATGCAAGAATGGAGGATCTTGTGATTCCATAACTGGATCCTGCAGCTGTCCAGTTGGGTGGACAGGGGTGGTATGCAACAAACCTTGCCCATTGAATTCATGGGGAGTGAACTGCTCCTTGAACTGCCCTTGTTCGGAAAATGCCAAGTTTTGTGATGGATTCACAGGGAAATGTGTCTGCCTGCCAGGATTTACTGGCGAcaaATGTGAGCAGTCCTGTCCTTCAGGAAGCTATGGTTACGAATGCAATGATAAGTGCCAATGTAAAAACAATGCAACCTGTTCCAGAGAAGATGGTACCTGCAACTGCACCCAGCCAGGCTGGACTGGGGTACTCTGTCAACAACCCTGCCCTGGGGGGTACTATGGGGTGAACTGTGCTGAGAAGTGCGAGTGTCAGAATGGTGCAGCTTGTGACCGGGAAACAGGAGCTTGCATCTGTACCAGTGGTTGGTCTAGTCAGGTCTGCAACAAGTCTTGTCCTGAGGGTTTCTGGGGTCGCAACTGTTCCATTCCTTGTTTTTGTGCAAATGGAGCACACTGCAACTCCATGAATGGCCAGTGCACTTGTTCTCCAGGCTGGACCGGATCTGACTGCAGTCTGCCCTGCAATGACTCCTTTTGGGGATCTAACTGTCGTAATGCTTGCCAGTGTGGCAGGGGTGTCTGCAATCAGGCTACTGGCAGCTGCCTCTGTTTTCCCGGCTATCGAGGCCCTAACTGTGATCAACATTGCAGTGGCAACCGCTATGGGCAGAACTGTGCCTATAACTGCAGCTGTGCTTCTTCTTCATCTACTGGCTGTCACCACATTTATGGCTATTGTCAGTGCAAACCAGGTTTTACAGGACCACGCTGTGATATTCCATGCCCTGCTGGCACATGGGGGATGAACTGTTCTCAGTTGTGCTCGTGCACGCTTCATGGAGCGTGTGATCCAGAGTTTGGAAACTGCACTTGTGATAGAGGATGGCAAGGGTCGCTTTGTAACCAGACCTGTCCCAGCTGTGGTCAGCCCTGCCCTAGATGTCACCATGAAAATGAATCGTGCGATCACGCTTCAGGAAAATGCATTTGTCTTCCTGGTTACCAAGGGAGCTCATGTCTGGAGGCTTGCACTGCAGGTTACTATGGCAACAAGTGCCAAGCAAAGTGTGTTTGTACAGATGGGGGAACTTGTCATCACGTAACAGGGCAGTGCCTGTGTAAGCCGGGATGGACTGGGATCCACTGCGAGAAAGTGTGCCCTCAGGGGTCATATGGTCACAACTGTACCCAGTCTTGCTCCTGTGTTCACGGAACATGTGATGCGACGGACGGGTCGTGCAACTGTAAGGCTGGTTACCAAGGTTACTTCTGTGACAGGCAGGCAGACAGCAGGAGATGTCAGTGTGGGAATGGAGCACAATGTGATCAAGAAACTGGGCAATGTAAATGCTCAGCTGGTTGGAGCGGAACAACGTGCGAGCAGTCGTGTAGCGCTGTCTCCCTCATTCCTGGAGTGTTTGGAGTAAATTGTTCTGAAAGATGCTTGTGTCCTGGGTCATGTGATCCGGTGACTGGAACTTGCTCTTGCCCACGTGGATTCCAAGGTCCAAATTGCATGGAAGCCTGTCCACTCGGACACTACGGAGATGACTGCGCACAGAGGTGCCACTGCATGAACACTGCATCCTGTGATCACATGAATGGCACGTGTACTTGCGCACCAGGATGGTCTGGCTTGAACTGTACGGATAGGTGTCCTATTGGTTACTATGGGATGCTCTGTGCTTCTAAGTGTCAGTGCAGTGCAAATAATACAGAGATTGTAGCATGTGATTCCTTGACAGGCGTGTGTAACTGCATCCCAGGATATCAAGGCTACAGGTGTGAGGAGCAGTGCCCGGAAGGTCGCTTTGGCAAACAGTGCGGCCAGCTTTGCAAATGCCGGAACAGTTATGCTTGTAGCTTCATAGATGGGTCGTGTACCTGCAAACCAGGCTACTATGGTCAGTACTGTCAGTACGCTTGTCCTGTCAATCACTATGGGGTTGATTGCAACAGCACCTGCCAGTGTGTTGCGTCCAATACGCTATCATGTGACAAGGAAGATGGAACATGTTCCTGCGCGAATGGATACACGGGAGTCTTCTGTGAGAGTGTTTGTCCCGCGGGATCCTTCGGGCGCGACTGCGTTGGAAAGTGCGCGTGCCAGAACGGTGCTATGTGTGATCACGTGAGCGGCACGTGCACTTGCACAGCCGGGTTCAAAGGTCAAAACTGCGATGTTTCGTGTACCGAGGGATTCTTCGGAGTGGACTGTGTAGGCAACTGCGTTTGCCGTAATGGTGCGAACTGCAGTCGCTTCACTGGCGAATGCCATTGTGCGCCTGGGTATGAAGGTAATCGATGCGAGCATGAGTGCTCCAGTGGAAGGTTTGGCGTGGGCTGTAACAACATTTGTGATTGTAACCTTGATAACAACGACGGATGCGACCCCAAAACTGGTGCCTGTATTTGTAAACTTGGCTTCAGAGGACCCAGGTGTGACGAGGCTTGTGAGGATGGTTATTACGGGAAAGGCTGCAGCAGATCATGCCCCGTGTGTTCAAGTCACGTGACTGGTCCGTGCATGAAGTCGATTGGCAACTGCTCGTGCTCTCCTGGTTACCGAGGTTACCTCTGCCTGGATTATTGTCCATTCGATCGCTACGGCCCGCGCTGTAACATGCCTTGCAAATGTCCTCTGGACGAACTTTGTCACCCCGTGGACGGCATGTGCTTGGATATTTCGCGTGGAAAGTTCTCAGTGATTGTAAACGACAGCATAGAAGAACTGAGTGATTTAGTGAGAAGACGAGACATAGAACATGGGCTAGAGAGATTGATGGAGCTTTACTTTTACGCCGATGTTTCATCCGAGGGTCAGATTATGGCGGCGTCCTTATCCGAGGGCTCTACTCTGAGCCAATCGCGCCTGGACTTGTTGGACGGAAATAACGGGTCATCCATTAAAACAGATCCTCCCCCGGGTCTCTCAAGCACGGGTATCGGGACAAATCCCTCAGCGATGAAACATTTGTTCATGGTGCGCTTGCTGGATTTGCAAGCAGTGACTAAAGAGGACAACGAGGAAGCCACGCGCGTTGTGTGCGTGTTGATCGATAACTATACTGTAGTGGATGGACATTACGTGGATGAGGTCCTTTCCAGAGTGTCCGAATGGAACATCTCGTCTGCGCTTAAGGTGGAATATTACTCTGGAAAGTTGTTCAAAAAGCCAGACTCCACTATGAAGATGCACCTACCTCTTATTATTGGCGTTTGTGTTGGACTTTTTCTCATATTAGTGATAATAGCCCTGTTCGCGTTCATACGCCGGAGATACAAACGAAAATGTGGCTTCGCAGCATACAAGAAAGGCAGCACTAAAGATCAAGCAGAGTTTGAGCTTCAACCATGGATCAGCCGTAACACAGGCTACTTACTAGCGTTTGACAATCCTTATTATGACGTGCTGGCTGCCATGGGTCTGGACGACGATATAGAAGAGGACTATTACAATCCACTCTACGATGATATGAGCATGTACAGTGACAGCGGTGAAAACACCAGCGAGGATAGCTGTCACAAGGATCTCATTTCCATGGTATTACGGTGA

Transcript

BRAKERYMET00000003485

Protein

BRAKERYMEP00000003485.1

MPSFLDEVRVLRSIEVIVIFLTAVHVGEFQAENLLYGSRLGTFPKPDFRTNFTLKSNQGSNSFKQIRHGLNVDPFYVRVYAKPLEGQNKDFCFNGIGSSQSSPSKSSYGGVIFAYNSEFVRVWAPTHPNGHIVFVKSGWGGELNPQESDEAEVVVEIWKDGPAPTFQIDHVIDTTMHISSQTYHKVDHELRQLPERVVVKLSPLETNERDETNPNNGFWFPAVAASQNPNPSSNFGGVIFAYNERYVRLWAPDGDNNNTGCIFIGQEWGGGHFTQRASKCRVEILLWVNQLPVPTFQSKWIEFSGQRDKKSFEEIGFGDDRLPAHVLVQLRAVDGRNIGYVFEAQGATQSDDSGTNEYGGVVFAYNENTVRIWAPSRSSGSKKGYPLLVKSGWGYGFNLQDGSDDVHVRVLVYSSKCNSSSEVLYEGNNCVTTLYDSYKMLTSQWSECSSICENGTQSRSLTGCDAVLRKTFLSCDFDDGSHLCGWTNKRTGGSLWVTSNTSTPEPNTGPLWGHPMGSYYAYTNTTTATPDEEVTLTSPNTRGCEKCHLRFSWNMFGGDVGTLKVMVNTKNPLLGPNGRWEDSEWKMEGSQGDIFWRAAFVNLEKFGKVYQVRFVHVLPKTDCGQNEPCTTCKSQKCAAANVAISGIKLDCHQNIGKQVPLNMCKTREVPLSGCEISADKPFEKGPAYSTEKIGSEKYVKAVGSYGDIIAKYEFKVVFTASYVVWKRTFATSNLTNDISFKINSGDWYRWRPPHKGSHGLWTEYYYQNFTLRPGIHTITLSQEEYGFRISKLAIVPAEISMWTDLGMQSRLIPDSFLSANPHSNPPPRFGRLFAKDAWCSSDHNQKYVYFQVRLPQLALVSGISIQGGKDILQKMNDYWITSFRLKVSLNGEEYTWYRDSHGRRTFKGNTDASNVNHHKLEFAAPARAIRIYPWHWKNWICLRVELYGFYLSSEMCSFSGHSRTSQTCVGDRNCGQNAGCVKETQRLRIQKQVIDGYSDGVLKNRSGESCHCHQGYHGPSCEHFGCSSNPCHNFGQCSEVNNTFTCTCQPGYHGSLCQNICESGFYGFNCSGKCKCTEHGSCDIATGHCNCKQGFRGKYCEQVCSPGYFGSYCSQRCQCKNGGSCDSITGSCSCPVGWTGVVCNKPCPLNSWGVNCSLNCPCSENAKFCDGFTGKCVCLPGFTGDKCEQSCPSGSYGYECNDKCQCKNNATCSREDGTCNCTQPGWTGVLCQQPCPGGYYGVNCAEKCECQNGAACDRETGACICTSGWSSQVCNKSCPEGFWGRNCSIPCFCANGAHCNSMNGQCTCSPGWTGSDCSLPCNDSFWGSNCRNACQCGRGVCNQATGSCLCFPGYRGPNCDQHCSGNRYGQNCAYNCSCASSSSTGCHHIYGYCQCKPGFTGPRCDIPCPAGTWGMNCSQLCSCTLHGACDPEFGNCTCDRGWQGSLCNQTCPSCGQPCPRCHHENESCDHASGKCICLPGYQGSSCLEACTAGYYGNKCQAKCVCTDGGTCHHVTGQCLCKPGWTGIHCEKVCPQGSYGHNCTQSCSCVHGTCDATDGSCNCKAGYQGYFCDRQADSRRCQCGNGAQCDQETGQCKCSAGWSGTTCEQSCSAVSLIPGVFGVNCSERCLCPGSCDPVTGTCSCPRGFQGPNCMEACPLGHYGDDCAQRCHCMNTASCDHMNGTCTCAPGWSGLNCTDRCPIGYYGMLCASKCQCSANNTEIVACDSLTGVCNCIPGYQGYRCEEQCPEGRFGKQCGQLCKCRNSYACSFIDGSCTCKPGYYGQYCQYACPVNHYGVDCNSTCQCVASNTLSCDKEDGTCSCANGYTGVFCESVCPAGSFGRDCVGKCACQNGAMCDHVSGTCTCTAGFKGQNCDVSCTEGFFGVDCVGNCVCRNGANCSRFTGECHCAPGYEGNRCEHECSSGRFGVGCNNICDCNLDNNDGCDPKTGACICKLGFRGPRCDEACEDGYYGKGCSRSCPVCSSHVTGPCMKSIGNCSCSPGYRGYLCLDYCPFDRYGPRCNMPCKCPLDELCHPVDGMCLDISRGKFSVIVNDSIEELSDLVRRRDIEHGLERLMELYFYADVSSEGQIMAASLSEGSTLSQSRLDLLDGNNGSSIKTDPPPGLSSTGIGTNPSAMKHLFMVRLLDLQAVTKEDNEEATRVVCVLIDNYTVVDGHYVDEVLSRVSEWNISSALKVEYYSGKLFKKPDSTMKMHLPLIIGVCVGLFLILVIIALFAFIRRRYKRKCGFAAYKKGSTKDQAEFELQPWISRNTGYLLAFDNPYYDVLAAMGLDDDIEEDYYNPLYDDMSMYSDSGENTSEDSCHKDLISMVLR

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60462	Neuropilin-2 OS=Homo sapiens OX=9606 GN=NRP2 PE=1 SV=3
O35375	Neuropilin-2 OS=Mus musculus OX=10090 GN=Nrp2 PE=1 SV=2
O35276	Neuropilin-2 OS=Rattus norvegicus OX=10116 GN=Nrp2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003792 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00053 all species →	Laminin_EGF	Laminin EGF domain	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002049 all species →	Domain	Laminin-type EGF domain	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000998 all species →	Domain	MAM domain	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR006212 all species →	Repeat	Furin-like repeat	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR042635 all species →	Family	MEGF10/SREC1/2-like	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24043 all species →	SCAVENGER RECEPTOR CLASS F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005044 all species →	Molecular Function	scavenger receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000003485.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.