Gene detail

Detailed information of BRAKERYMEP00000003944.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3116381.1, unnamed protein product [Porites lobata]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000003944

ATGGAAGAGTTTGTGCCTGTATCCAAAGATTTGAAACGTTATGTCATTGGAAGGGGAGGCAGTATAGTGAAAGATATTCAGAAGACATCTGGAGCAAGAGTTCATTCAACTTCGAGAGATTCGGAAGGGTTTATGGTCAAAGGAAATGAAGAGCAAAGAGCATTCGCGAAGACGCTTATATTGGAAAAAGTGGAGGGAGGAAAACTGAAGcgtgatgacaaagaattgaatAAGGTCTGTTTCTACATCGATGCACTGAATCTGTCTGGGAATAGTAAACTTAAACTGGAGAAGGCTGTAGAAGCTTATGGGGTTCACCAAGGATCGCCGCAAGCGCAGTATCGATTGAAAGCTGCCCGCTTTTATAGAAGACAGGAATCTCGCAATCTTAGTGAAGACCCAATTTATTTTCGAAAACTCGAGGCTGACGTTTTGGACTCCCTCCAAAGGATCAAACGTGAAATAGAAAGAAAGCAGCACCTGAAGGCCGACATGTGGTGTCACTTTGGCACGGTGCTTATTCGCCAACCTACAGAAGGCACTGAAGGAGAGTGGAGTATTGAAGACGTTTCGAACAAGCTCTTGCCTTCAAGGGAGGGGAATCATTGGAAAACTGTATTTAGAGGAGGGGTCAACTTGGACGAGACATTCAtagaacaaaatatttggaacctGACCCATAATGAATATGAAGACTATTCATCCAGATACGATTTAGCATTTGCCACGCCATGTGGTCGTCAATTAAGATTCAAGGTTTGGGTCATAAAGAAGAACGTCGGAAAAAAAATGGAGGATATACCGATCCCCTTCAGTGACGTAAAGAACATTTTGGATGAGATACACTTTGAAGACGAACTGACGCGGTCGCGATGCAGAGGATGGCTGGTTTTACCTTCTAGAAGATATCTGCAGGCAGACATCTTGTTTCCCGGTTGTGAATTTGATTGCAGACTCACTATTCGTGAACGAACAGAAAAAGGTCTTGACACAGACCATGCGCCAAAAGAGGAGACAAGATGCGCCTTGTTGGAATATCTCTCCAAAGTTACTTTTACAGATGAAGATGACTTTGGACTACGTCTTCCGGGAGAGAACTTTATACCACCTGGATTTCAGCTACACTACAGGCGTTGTTCCAAACGAGCTTTGTATGGACTCATGAAAGGCTTTTCCATTATTCTTTCGAAGGAGAGTACGTATGGAACCGACGTCACAACGGAGGGGACTTGTGTATCGAAGACCGACCTCTATCTACATTGCGAAGAGTGGGATGACTTGCTTAACAAGTGTGGAAACTGGGAGCCTGAAGAAATAGCTAAGAAGCTTCCCGAGTTTTTCCGGTTTGTGAAGAAAGTCCAAAGTTCCGTTATTCATGGAATGAAACATAAAGGAGAGGAAGACAGCACTGTGGGAATAGATGTGGATCCTTCTCATTTCATGGTTACAACCGCAATATGGAGAACAGGGACAACAGATAAAGACGATAACTCTGATGCAGCCATCTCATTTGAACATCAAACTGCAAATTGCATCGCAGATAGCTTGAAGAAAGGAAGCAAAACTAACTTGATGACAGGAAATAATACTCATGAAAGTTCAAAGAATCCCACTTCTGAGCTCGCTGAGAAACCTCGAGCACCAAGTACCACTAAGCAACCAGGAGACGAAAAAGGCACTGACTTTGTGACCACACCAAGACTCAGCAGAGATATACCATCCGTGAAACCTAAtccaaataaaagtaaaaaaaaggatGACCCTTCTCCTTTGCACGTGCCAGAGGAAGTAGCTACTGTAACTGAAACACTCCTCCAGAGGGAGTTACAAGACAACAAGGAAGACATTTATTCCGTGTTGTGGGATTTTGCCGGTCAGTCAGTTTATTATACGACGCATCCGCTCTTTCTAACAGAAAGAGCGATCTACTGTTTGCTTTACGACCTCAGCCTAGATCCTAATGGAAAAGCCAGGCCTTTGGTGAAACAAGGAGTATACaagaaaattcaacaaaaatgcCATCTAACAACCAATCTGGATTATCTTGATTTCTGGATGATGTCGGTGGCTTCTTTGAGCAAAAGCAATAGCAAGAAAGCTGATGGCCTTGCTGTGTCAGAGATACTGCCAGAGAGGCTACCAGCAGTTTTTTTAGTGTGTACTCATGCAGATACCCCTTTTAATAAACGCGATCCTAGTGATTTAGCCCATGAGATTTTTGGGTGTCTAAGGAACAAGCCATATGGAGACCATTTGGCCGGTGTGTTTTTTGTGGATAACACAAAGTCGGGAACTGAGTCTGAATGTCCAGAAGTTGTGCGTTTGCGACAGGAAGTGCTTGCTCTTTCCAAGGAACTCCCTCACATTCCTATTGCTGTCAAATGGTTAAAATTTGACAAGGCTCTTCAAGAGTGGGGCAAAGATACATTTTTGAGACCCGCAGGAACCAAGCTATTCCACAATTTTGCTAGATTCTTCGTGATCACACCCAAAGAAGAGGAATTTCAATCCAGTCCTGTAGCTAGTACATCAAAAAGTGAAGCTAATCCAACTAACCCCGGAATTCCTGACAGACCACTGAAAGTGACTCTCCTGGCAAGTGAATGGGGCTCATCTATGGGTGGCATGTCAACCATAAACAGAACCCTTGCCATTCAGTTGGCGAAACACAGTCAAGTAAAGGTAACTCTCCTTGTTCCACAAAAAGCATGCAGTGAAGAAGACAAGGAAAATGCTCGACAACATAACATTGAAATTCAAGAAGCGACGACACTCACTGGCTTTGATCTGCTTGATTGCTTGAGCTTTCCACCACGAGACCTTGAAATTGACGTCGTAATAGGACACGGTGTAAAGCTCGGGAAACAAGCCCAAGTTATTAGAATCTGCCACAGTTGCAAGTGGGTGCAAGTAGTGCACACTGTACCAGAAGAACTGGGAATGTACAAGGAGTATTCCAGAGCGATTTCTAGAGGCGAGAAGAAGCACAGAGCTGAAGTGGATCTGTGCAAACAGGCAGATCTTGTCTTGGCGGTCGGTCCAAAGTTGGAGGACGCTTATTCCTCTTCCCTGCGGTCATGCGAGAGACCCAAAGACATAATTCAATCGGACGACCACGACCACAGTGAAAGTTCAGAAATTATTGATAGCGAGTTTGTGGAGGTTCCAACGAGCATGAAGAGACATGTGATAGGAAAGGGTGGCTCTAAAAAACAGGAAATAATAGATAAATCTGGAGCTTTTGTCTACACAAAGAGCAAGGACGAAGAAGGCTTTACAGTCACCGGAAATGAGGCACAAAGGGCGTGTGCCAGGAGGCTTATAGAGGAAACAGTGAGAGATGTACAGAGCCGTAATTTTAGGGAACGAGTGCCAATTGCAGATGACTTCAAGCCCTTAGTGATAGGCAAGAAACACGCCAATCTTAGAGCAATCGGTGCCCAGACAGGAACAAAGGTGATCGTAGAGGATGGAGAGGTTTATATTATTGGAAATGAAGAGCAAAGGAAGCAGGCGAAAGTAAATTTAGGATCAACAGTGGCCTTTGCAAGACGTAGACGGTTGGAGAGTCAACACAATAAAATCTGCTACTTCATTGATAGCTGCCATCTTCCCGATGACTGTAAACTTAAGGTGGAACAAGTGCAACCCAACAATCGTATGTTGCTGCCGGAATCGCATGCTCAGTATAACCTGATACCTACAACGGAATATGATCAACAGAAATCAATCAGCCTCGATAGTCATCCAAACTACTTGTCGCAGCTGATGGAGGACGCTCTGATGACACTGCGCAAGTTACAAGAAATGGAGACGCATCCGAAAGTTGACATGTGGTGTCACTTTGGGACAGCAATCATCAGAGTTCCTGAGGAAGATAACGTTATCGACAGAGAATGGAGTATCCATCAAGCAACAGAAAAGCTCCAATTGACCGATGGAGAAAATAACTGGAAACTGGCTTTTCGTGAAGGAGTCGATCTTGAATTAAGGACATTTAAAGGAAATGGCTACAAAGAGGCTCCTGAGGACATCTCAAGATACGACCTAACTTATCTAACGCCGAGCCGACATCGACTGTTGTGTAAGACAAATGCCCTGTGTCTTGTCACAGAGAGCGGCCAGGCCACAGGCTATGCACCAGATGAAGAAGAAAGACATGCTTTATCATCGTACCTATCTCGGCTAACATTGACCAATAAGGATGGATTTGGACTTCTCAGTCTTCCTGAGAAAATACCCGAAGGATTTCATTTAGTCGACAAAAGACTGTGTAAAAGAAATCTGTTAACCACAGAATCAGCTTTTACCGTCCTCCTTTCCAAGGAAATAACGTGGCATACGTTCAGGGGAAAAGAGAAACACGGGGAGTGGGTGACCACTGAGACCTGGAGAACAGGGACGACAGGAAAAGAGCAAAACGTTGATGCAGCAATTTCCTTTGAACATCACATTGCAATGTGGATTGCGGGTGACTTACAGAAGGAAGATGAAAGTATCTGGCTTGAAACAAGcacagaagaaaatgaaactctGTCTGATTCTGAAGGCAGTGAAATACCAAGCGAAGCAGGTGCACCCGAACCAACAGGAGATGACGAACACAACGGAACACCTAGCGAACCAAAAGTCAACCTCAACAGAGATGCATCCCACATATCACCCACTCAAACAGACCACAACGAAGGAGCCATCTCTGATTCTACCCCTTCCTTTCCGGAGGAGGTAGCAATGCTCACTCAAACATTCCTTGAGGATGATTGCGAGGACGATAGAAAATATGTTTATTCCACACTGTGGGATTTCGCTGGGCAGTCAGTTTACTATGCCACACACCCGCTCTTCATGACAGCACGAGCGATCTACTGTTTGGTTTATGACCTTAGCTTAAATCCACACGAGTTAGCAAATCCCATGGTGAAACAAGGTGTATACGAGAGATATCGAGAGAGGTCCAGTCTGAAGACCAATTTAGATTACCTGGATTTCTGGATGAGCTCTGTGGCTTCTGTGGCCAGATATGATGACGACAACATCGATGGCATTTCTAAAGCAGAGGTGTTGCGAGAAAAGCTTCCTCCTGTTTTCTTAGTGTGCACTCATGCCGATAAAGCTTATGATCAGAATCGAAATCCCACAGACTTAGCCCGTAAGATGTTTGGTTGTCTAAAGAGGAAACCCTACGGAGCCCATTTGTTTGACGTGTTCGTTGTGGATAACACAAAATCCGGCACAAAGTCTGAGTGTCCAGAGGTGATGCGTTTGAGAAAAGAAGTGCATGAGGTTGCTGAAGAATTACCATATACGAAAGAAACcattccaatcaaatggctaAAATTTGATAAGGCCCTCAGAACCCTGAAGGAAGAAGGAGAAAAATTTATTTCTCTGGATACTGCAAAATGTACTGCAGAAAGTTGCAACCTCGTCGACGACACAGAGTTTGAGACAGTGATGAACTATCTGCACGACCTGCGAAGCCTGATTCATTTTGATGACACCCCAGCTTTGAATGAACTGGTAGTATTGGATACACAATGGCTGATTGATGTGTTTAAAAGTGTGATAACTGTAAAGCCCTATGACCCAAGGGAAAGGAAATTCGTCGAACAATGGTGTGAGCTTGAAAACGACGGAATCCTGCATGAAGAACTTTTACGTCATGTGTGGAGTAGTTTGAGTGAAAACGATGAATTGCATGAGGTTCTGGTTAGTGTCATGGAGAAATTCAGTTTGCTGTGTCCTTTGTCATCAGAAACCACAAGGAGATACTTAGTGCCATCTATGTTACAAACACAAGCATTATCCGATATTCGTGAGCTGATTTCGTCGGCACAAATTCCCTCTCTGtttatcaaatttgaagctGGGCAAGTCCCAGCAGGTTTCTTTCATCGCTTTGTACTTCAGTTCTTTCAATCTGACAAAGATACATTTTTGGGAATTGAAGGAACCAAGCTATTCCAAAATTTTGCTAGATTCTTCGTGGTGACACCCAAAGAAGAGGGCACAAGACAGGGTGATATAAGGCGAAAACGGCGATAG

Transcript

BRAKERYMET00000003944

Protein

BRAKERYMEP00000003944.1

MEEFVPVSKDLKRYVIGRGGSIVKDIQKTSGARVHSTSRDSEGFMVKGNEEQRAFAKTLILEKVEGGKLKRDDKELNKVCFYIDALNLSGNSKLKLEKAVEAYGVHQGSPQAQYRLKAARFYRRQESRNLSEDPIYFRKLEADVLDSLQRIKREIERKQHLKADMWCHFGTVLIRQPTEGTEGEWSIEDVSNKLLPSREGNHWKTVFRGGVNLDETFIEQNIWNLTHNEYEDYSSRYDLAFATPCGRQLRFKVWVIKKNVGKKMEDIPIPFSDVKNILDEIHFEDELTRSRCRGWLVLPSRRYLQADILFPGCEFDCRLTIRERTEKGLDTDHAPKEETRCALLEYLSKVTFTDEDDFGLRLPGENFIPPGFQLHYRRCSKRALYGLMKGFSIILSKESTYGTDVTTEGTCVSKTDLYLHCEEWDDLLNKCGNWEPEEIAKKLPEFFRFVKKVQSSVIHGMKHKGEEDSTVGIDVDPSHFMVTTAIWRTGTTDKDDNSDAAISFEHQTANCIADSLKKGSKTNLMTGNNTHESSKNPTSELAEKPRAPSTTKQPGDEKGTDFVTTPRLSRDIPSVKPNPNKSKKKDDPSPLHVPEEVATVTETLLQRELQDNKEDIYSVLWDFAGQSVYYTTHPLFLTERAIYCLLYDLSLDPNGKARPLVKQGVYKKIQQKCHLTTNLDYLDFWMMSVASLSKSNSKKADGLAVSEILPERLPAVFLVCTHADTPFNKRDPSDLAHEIFGCLRNKPYGDHLAGVFFVDNTKSGTESECPEVVRLRQEVLALSKELPHIPIAVKWLKFDKALQEWGKDTFLRPAGTKLFHNFARFFVITPKEEEFQSSPVASTSKSEANPTNPGIPDRPLKVTLLASEWGSSMGGMSTINRTLAIQLAKHSQVKVTLLVPQKACSEEDKENARQHNIEIQEATTLTGFDLLDCLSFPPRDLEIDVVIGHGVKLGKQAQVIRICHSCKWVQVVHTVPEELGMYKEYSRAISRGEKKHRAEVDLCKQADLVLAVGPKLEDAYSSSLRSCERPKDIIQSDDHDHSESSEIIDSEFVEVPTSMKRHVIGKGGSKKQEIIDKSGAFVYTKSKDEEGFTVTGNEAQRACARRLIEETVRDVQSRNFRERVPIADDFKPLVIGKKHANLRAIGAQTGTKVIVEDGEVYIIGNEEQRKQAKVNLGSTVAFARRRRLESQHNKICYFIDSCHLPDDCKLKVEQVQPNNRMLLPESHAQYNLIPTTEYDQQKSISLDSHPNYLSQLMEDALMTLRKLQEMETHPKVDMWCHFGTAIIRVPEEDNVIDREWSIHQATEKLQLTDGENNWKLAFREGVDLELRTFKGNGYKEAPEDISRYDLTYLTPSRHRLLCKTNALCLVTESGQATGYAPDEEERHALSSYLSRLTLTNKDGFGLLSLPEKIPEGFHLVDKRLCKRNLLTTESAFTVLLSKEITWHTFRGKEKHGEWVTTETWRTGTTGKEQNVDAAISFEHHIAMWIAGDLQKEDESIWLETSTEENETLSDSEGSEIPSEAGAPEPTGDDEHNGTPSEPKVNLNRDASHISPTQTDHNEGAISDSTPSFPEEVAMLTQTFLEDDCEDDRKYVYSTLWDFAGQSVYYATHPLFMTARAIYCLVYDLSLNPHELANPMVKQGVYERYRERSSLKTNLDYLDFWMSSVASVARYDDDNIDGISKAEVLREKLPPVFLVCTHADKAYDQNRNPTDLARKMFGCLKRKPYGAHLFDVFVVDNTKSGTKSECPEVMRLRKEVHEVAEELPYTKETIPIKWLKFDKALRTLKEEGEKFISLDTAKCTAESCNLVDDTEFETVMNYLHDLRSLIHFDDTPALNELVVLDTQWLIDVFKSVITVKPYDPRERKFVEQWCELENDGILHEELLRHVWSSLSENDELHEVLVSVMEKFSLLCPLSSETTRRYLVPSMLQTQALSDIRELISSAQIPSLFIKFEAGQVPAGFFHRFVLQFFQSDKDTFLGIEGTKLFQNFARFFVVTPKEEGTRQGDIRRKRR

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q55E58	Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum OX=44689 GN=pats1 PE=3 SV=1
Q54WS5	Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum OX=44689 GN=roco6 PE=3 SV=1
Q1ZXD6	Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum OX=44689 GN=roco5 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000460 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF00013 all species →	KH_1	KH domain	Domain	Interproscan
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF20706 all species →	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR004088 all species →	Domain	K Homology domain, type 1	Interproscan
IPR036612 all species →	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR004087 all species →	Domain	K Homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47679 all species →	PROTEIN TORNADO 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000003944.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.