Genomic Location: BLFK01000113.1:32229...67568
NR annotation: CAH3151756.1, unnamed protein product [Porites lobata]
Species Astreopora myriophthalma · all data for this species · gene families
| CDS |
| BRAKERYMET00000004289 |
| Transcript |
| BRAKERYMET00000004289 |
| Protein |
| BRAKERYMEP00000004289.1 |
| UniProt accession | Description |
|---|---|
| B5DF93 | Protein PAT1 homolog 1 OS=Rattus norvegicus OX=10116 GN=Patl1 PE=2 SV=1 |
| Q5R8Q4 | Protein PAT1 homolog 1 OS=Pongo abelii OX=9601 GN=PATL1 PE=2 SV=1 |
| Q3TC46 | Protein PAT1 homolog 1 OS=Mus musculus OX=10090 GN=Patl1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004010 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00612 all species → | IQ | IQ calmodulin-binding motif | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000048 all species → | Binding_site | IQ motif, EF-hand binding site | Interproscan |
| IPR039900 all species → | Family | Pat1-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21551 all species → | TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000290 all species → | Biological Process | deadenylation-dependent decapping of nuclear-transcribed mRNA | Interproscan |
| GO:0000932 all species → | Cellular Component | P-body | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0033962 all species → | Biological Process | P-body assembly | Interproscan |
BRAKERYMEP00000004289.1.
