Gene detail

Detailed information of BRAKERYMEP00000004850.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029187084.1, calmodulin-2/4-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P60206	Calmodulin OS=Ajellomyces capsulatus (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432) OX=447093 GN=CAM1 PE=2 SV=2
P60205	Calmodulin OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=cmdA PE=3 SV=2
P61861	Calmodulin OS=Colletotrichum gloeosporioides OX=474922 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011187 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13405 all species →	EF-hand_6	EF-hand domain	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR050403 all species →	Family	Myosin Regulatory Light Chain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23049 all species →	MYOSIN REGULATORY LIGHT CHAIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016460 all species →	Cellular Component	myosin II complex	Interproscan
GO:0032036 all species →	Molecular Function	myosin heavy chain binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02183	CALM; calmodulin	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.