Gene detail

Detailed information of BRAKERYMEP00000005216.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_029186236.2, phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERYMET00000005216

ATGTCGTTTCCTTGGCATCACTCAAACATCAGTAGACTTCGGGCGGAAGAGCTACTTTTACGCGCGGGGAAAAATGGTGCTTTTATGATTCGCGACAGCGAAAACATTCCCAATGCGCACGTCTTGTGTCTTCTGCACGAGGGAAGAATCCATCATTACAGAATCTTGCGTACTGGCACCAATGGGAATTTCTATATGCAGGCTGTTCCTGGAGTGGAACCTCGAGACTTCGCCAAGCTTGAACACCTGGTGACTTTTTACAGCCAAGCAAACCAAGGTCTTCCTTGTGAACTGAAACAGGCTGTAGCATCTCCAGACTGGAATAGTATACCTGATGATGATTCTGatgatgaagatgatgatctTGACGAGGCAGATGGCAAACAGGCTGAAAATTTGATATACAGTTTTCCTCCCCTATTCAAGAGTAATGTTGACCAGCTAGATTCAGAGAGCCTTGATCAAGGGTTTCAGACAGCACTGGGCTTATATCTTGGAGATGGGTTGAGAATTGACATGGAGACAGCCTCCAATGGGGGATCTGTTTTGGAAGGAATGCAAAATCTGCTGGCCTCTACATCAGCCAATCTCATCAAAGAACTTCAGTTGCTGTTGTCTAGAATCAGTGTGCTTCAGAATGTGTTCAGTGCTAGAAATCAGACAAAGCTGGAGAAACCAAACTTTAAATTGTTGATGGATCTTCTGGCAGAGAGCATCGCTGGATCAAAATCTCTACAAACACAGGCATTAGATGCTCTGAAGGAAGTAGCAAACATCAACCAAGAGGAAGACAAACAGGAACCTGTCAACAGAAGCCGTACCTTTGAGGTTATGACACAAGGAATGGCGACATCCAGCTTCAAGAACAAGCTGTACATTTTAGTGAATTATGCAGAAGGGAAGATCTCATTTCTGAAGAGTTTGAATGATCCCTTGGATGTTACTAATACTTCAGATCAGAGCAAAGTTGTCCAGCTGGTAAAGTCAAAGGATAACATCAAGAGGTTACAGCTAAAGATACGTTCTAAACAAGCCAGAGACTTTGAATTTGATGATGGCAAGtcaagAGAAGTTTTTTGTCAACTTGTACAACAAATGAAGAACCAGCATTCtgaaaacacgataaaaagggaAGCTTCAGTCTTCATTGGAACATGGAACGTGGGCAATGCGAATCCTCCTCCCGACATAAAATCATGGTTCAAGTGTCAGGGCAGTGGTAAAACCATGGATACCAGTTTGGCTCAGTTCCCACACGACATTTATGCAATTGGCACTCAGGAATGCTCCATTGGTGAAAAAGAGTGGATTAACAGGATTAAAGGGCAACTCGAGAAGCTGTTTCCCAAGAAGGAATTTTACATGGTTGGCGTGTGTACGTTGTGGAGCATTCGACTCGTTATTTTTGCAAGTCAAGTTCTGAAGCACATGATTTCACATGTTCAGCAATCCAGTGTTAAAACGGGGATAGCGAATGCCCTTGGGAACAAAGGCGGAGTGGGTATTTCGTTCTCTCTTGGCCCAGTATCGCTGTGTTTTGTTAATTGTCATTTGGCAGCAAGAGGCACCGCTGCCAGAGTGTTAAGGAGAAATCAAAATTTTCTCGACATCCTCAATGGACTCAACCTTGGTCAGCGAAGTGTGTTCGGTATCACGCATCAATTTCACCATGTGTTCTGGTTTGGCGATCTCAACTACAGGATAGATCTGGAAGTTCAGGTGCTGACGAATGTACCCTCTTGGTGTGACAGAGTATTGAGGCATTCGTTTCCACAGACCAAGATCAGCTGCACCTCATATGGATGCACAGAACATATCAGATCAAGTGATCACTGGCCTGTTTTTTGCACTTTCAATGTCACCCTGCCGTTGCCTGTTTCCCCAGAAGAAGGCATTCCAAAGACCCCAGTATCCGGTGGTTGTGAGATATTGTTCCAAAGAATCATGGCAAAGATTAAAACGAACAGCAAAACTCAATTTTACGTTGAATTTCACTCCACTTGTTTGGAAGAGATGAAGAAAACAGACAAGAACAACATCTTGGAATCAACCAAAAAACACATTCTCGACGCTGCTATTGACGGCAGATCAAGCGGGCAATACTCTTACCCCGAGTGGGGTAGATCTGTCATCCCCGCGCTTTGTCCCATCATATCGGACTATAACTACCTGGCGGAGCAGCATCTGTTACTTGCCATAAAGTCTGTGGACAATGATGAGTCTTACGGAGAGTGCTGCATATCATTGAGGACAACGATCAGCGCGATTCCGCAGCAAAGTGGATTAATCGTTTTGTCACATCTTGGCGAGAAAACGGGAAAGATTGTAGTTGAAATGCACGTAAAGCTGCCAGACGACAACAACAAGGAGACATCGTCACGGCCAGATGATCTTGTTATAAGCGATGCTGATTTGGGGGAATTCTCGCCACCCTTCCCGGAAAGGCAGAGAAACTCGGGAAACCATCCAGTGGAGAACCCACCCGCAGTGCCAAAGCGACATTCGGCTCCTGTACCTTCCCCCAATAAGGAACCCTTGGCCATCAAACCTCCGCCTCTGCCCGAGAAGAAATCCAAACCTCGAACGGTCAAAGACTTGATGCAGAGAATCGGCTTTCCTCAGTACACACAACTTCTTCTCGATGATGGCTTTGATGATTTTCTATTCCTTTGTGACTTGAACGAAGAGGAGTTAAGAAGACTTGGTGTTCCGAAGGAACATCACAGAATGacaATTTTGCTGCAAAACATGTATCAGAATCCACAAAGTGCAGCACAGGTCGCTGATGGGACAAgTAGTGCCATATCAGACGTAGAAGCTCAGGAACACTATGACAGATTTTTCGAGGATGTATTCCTTGAGCTTGAAGAAAAGTACGGAGAAATTGAAGAGATGAACGTATGTGACAATCTTGGTGACCATCTTGTCGGCAATGTGTATGTCAAGTTTCGCTATGAAGAAGATGCAGAGAAGGCTGTGAAGGACCTTGATAATCGCTGGTACAATGGCCAGCCTATCTATGCTGAACTGTCTCCAGTGACTGATTTCAGGGAGGCTTGTTGCAGACAGTATGAAATGGGgtaa

Transcript

BRAKERYMET00000005216

Protein

Uniprot

Uniprot term	Description
Q6P549	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1
Q9WVR3	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1
A0A8I3NFE2	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Canis lupus familiaris OX=9615 GN=INPPL1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07647	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF00017	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR003954	Domain	RNA recognition motif domain, eukaryote	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR001660	Domain	Sterile alpha motif domain	Interproscan
IPR000300	Domain	Inositol polyphosphate-related phosphatase	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR009145	Family	U2 auxiliary factor small subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46051	SH2 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016791	Molecular Function	phosphatase activity	Interproscan
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation	Interproscan
GO:0009966	Biological Process	regulation of signal transduction	Interproscan
GO:0050776	Biological Process	regulation of immune response	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0089701	Cellular Component	U2AF complex	Interproscan