Gene detail

Detailed information of BRAKERYMEP00000005287.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3146269.1, unnamed protein product [Pocillopora meandrina]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CZX8	Small ribosomal subunit protein eS19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3
P17074	Small ribosomal subunit protein eS19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=1 SV=3
Q8T5Z4	Small ribosomal subunit protein eS19 OS=Branchiostoma belcheri OX=7741 GN=RPS19 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006552 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01090 all species →	Ribosomal_S19e	Ribosomal protein S19e	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001266 all species →	Family	Small ribosomal subunit protein eS19	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11710 all species →	40S RIBOSOMAL PROTEIN S19	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000028 all species →	Biological Process	ribosomal small subunit assembly	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000005287.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.