Gene detail

Detailed information of BRAKERYMEP00000006552.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044177687.1, uncharacterized protein LOC114961598 isoform X3 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000006552

ATGTTTGTGTTACTAAGTCGTTTAACATTCCACTCTTACCTAAATCAGCCGTTCTTTATTTCAGAGCACTCGAAAAAGACGCTCATTCCTGGATTGCCCTCAGGAATACCGGGCGTTTCAATTCCAATAGCCTCTGGAAATGCTAGCACCGTCCcTGTAATAACCGGCAACAACTCTCTCGTACATGCTGCCACAGTCGGTGCTTATGCGGGGGCCCAAGCTGGTGTCTTCAGTGGTGCCAAGGCAGGCGCAAAGACTGGAGCAAAGGCTGGAGCTGAGGCGGGAGCAAAGGCTGGCGAGGAAGCAGGTATCAAGGCTGGCGAAGAGGCTGGAAAAAGAATTGCCCACATGATCGCACTAGAAACGGTTCAGAAAATTTTGATGGCACAAATGCAGACGGGccatgttttcaacatttttggaCAACATCCAACGGAGAAGCCAGCCGCAGAAGCGGGAGGCGAAGCTGCGGCTGCAGGGTCAGCTGGTGCAGGTGGTGGTGCGAGCACATCTGGAACAGGTGGAGCAACTGTAACGACGAGTACAACTGGTACAGCCGGTACAACGGGTGGTGCAACGGGTGGTGCAGCGGGTGGTGCAATGGGTGGTGCAACGGGTGGTGCAACGGGTGGTGCAACGGGTGGTGCGACGGGTGGTGCAACTGGTGGCGCTGGGGCTGGAGGAGGAGGAGCAGCAGGAGAGACTGTTGCTGGCGCAGGGGCGGGAGTCGAGGCAGGAGCAGGAGCTGGTGCAACCGCTGCAGGTGTAACGTCTGGTGTGCCTATCGTGGGAGGAGTCATGAGTGAAGGTTCAAGTCGTGCTGCAACTATTGCAGCAGCTTCGGCTGCGGCTGCAGCTGCTGCTACAGCAACAAGTATAGCTGGTATGGGGGCACAATCAGGAGGAGGCGCTGGTCCCGCTGCTGCAATATCCGCGTCTGCTATTGCGAAGGCCAACGCGGCTGCGGCAGCAGCAGTTACCGCCACTGGAGCGGCTAAGGCTTtCTATCAAGGGGCACTATACCTGGTGTACTCGATAAACCATCCTGCGCCTAACGACCAAAGCATGGCCTGTTTCTACATAAAAGGTGAAGATCTGCTGGTGGGACCAAGATGCCAGTACTTCATAGCTCATGTGCCTGGGTTCAGCCGGGATCGCGACACTATTTCTCTGGAGTCTTATTGTAAACGAGGCTATTTTCTACGTCAGAAGCAATACGGATTTATCCTGGCAGCCGCCCACGCAAGCTTATACTTCGCCAAAGATGCCTCGTTTTACATAGGGCGCCGAGTAGAGCAAAAGGAcaccttttcattttcattgattCACCAAGGCTGGTATCTCACCGTGTCTGACATGACAGGTGATTCATGGAAAACTAAAGCTTCATTTGACAATAAAACACAGGAGTTCGCTTTGGATAGTTCCTTCATTGTGATGCCTTACACAATGGATGATCCTCTAAAGAACTGTGACACAATAGGCCCTGTAAAGCCAGAGGGACCTGGGGTGCAACCCGGTAAACCAGAGGCTCCTGCCCCCCCTTCACCCATCCCATCAACCAGCGGACCACCTGGAAGTAAATGTATCGCGCTTCGTTTCATCAACATGGTTGGCCATCCGTTCCAACTCATTTCCCATATGAAGACCGAAGGCTGGCGCGTAACAGGGGAGGAATTCAAAATAAGATTAACATTCAAAAATCCAGAACTTCACAAGTTTATTACCTTTAAAGCAGAGGACCTTTATGGCAAACTTTTAATTCACTTGGATGGCGACAAAACCATATCTGTAATGCCTAGGACCAACTGTGACGAGTATATCGATGTACAGGTCACTGGTGTACCAGCTCCAACTACAGCAACTACTGTGACGCAGCCACCGACAGTTGTTCAACCTAAAACGACACCAGCGGctgttccaccaccgccgccgACACCATCTCCTCCACCTCCTCCCCCTGCCCCTCCCCCgcctcctcctccccctcctccacctcctcctcctccccctcctccacctcctcctcctcctccacctcctCCTCTTCCGCCTCCTCCGCCACCGCCTCCTCCCTCACCTTCGCCGCCGGCCACGCCCCCGCCAGCACCCCCTCCGCCGGCTGTTCCTCCTCATGCTGCCCCACCAGCTCCCCCACCAGCTCCCCCGAGTGCACCTCCAGTTATGCCTCCTCCTCCGGCTCCACATCCGCCAGCAGCCGGTGGAAAAGATGTGCACTACCACTTTCACTACCATCCTGATAGTCTCTGTGCGTTAGTTTGCCGATCACCACAGACCGCCTGTCGTCCGCCGTGTCCTGTCGGGTGTTGCAATGAACAATTCTATTCGCCTTCCATCAGAGCGAAACGTTCCGAAGTTAAGATTATACCAGCCTCTGAGCGATCAAAGGTCGCTCGACAGAGTTGTAGTTGCCTTATGGAATGCGATGGAAAAGGCGTGGATGAGGACAGTGGAAGGTGTCACGAGGAATGTACATGTCATCCGGATAAAGATTTTTCGAGTGTAAAACCGAGAAAATCCGCACAAAAAAAGTACGCgaaaagaaaacggaaaaagtTTTCCCATCCGCAGATTGGAGGAAGAGAAATGGATAAAATAAAGCATTTGTTTTCTAACTGGTTTCAAGAATACAACAGAGGCGATAACCCAAAACCAGAAGAACAGACGAAAACCAAAAATGAGCCACTGAAGGATACACGCGTTGGCTTTATCACAAAAATGCTAACAAACTACCAGTATTTTCGCCAAAAACAGAAAGCGTTGAAACTTTTGCAGCAGCAGCAAGACGAACTGGGGGAACAACAGAAGCATTTGGAGAAATTGTTGACCAAACAGGAAAAGGAGATGTCGAGTACAAGCGGTTCCAGAGTTAAAACTCTCAGACTTAATCCATCAAAATTTAGGCCACGTCTTTCCCTCGCTGATGATGTCAATATTTCAATAACCACAGCCAACACTACCGGTCAGGGACCACACACAAATGCGACTTCGAATGTCAACGCCTTCAGGTTAAATCAACAAACCTCAAACGAAATCGAAGCTATAAAAGCACAAATAGCCGAGATCAGAAGCCAGCAAGATTTCCTTTCAAAGCAACAATCCCAACTAGCCGTCCAGTTAGCAAAAGAACAATCTTTTTTTGAGAAGGCCCTACAGGTTGTTCATATGATCCTTAGACAAAACCAAAGTGGGGGTGATACAACAGATAGCAGTTCTTTGCCAAAACCTTTCTTAAAACAGTTGGATTTTCAAGGCCAGACAAATGCCGAGGAGACGCCAACAAAGATGGCAGCCGCGGCACAGGGCTCGGGCATGTTACACAAACTGCAGACTGAACTATCAAAATTTGTATTCAGAGACGACGATGTACCGGAAGGCAATAGCGATTATGGTCATCCAAtgatgtttttgaaaaatgaTCAAGAGGACCAGTTCACTCGGAATGGAAATTcaattttgcagaaaaatgCAGAGATCTATCCGGAACCAAGCAGTGACATGTACAAAGTGCCCATGGAGATTGATCGTAGTGATGTGAATGATCAAGTGCTCAGGAATTTTTTACTTGGAAGAAATATTGTAGACGACGCTGGTATCGAAGATGCGAATGGTGATGAAATGGAGAAAGGAGATAGCGATGAGGAACCAGGGCCTGGCATTATAGTGATGGAGAAAAAGACGTTGCATACATACGATATGAGACCAAACTCACACAAAACGAGTGAAAGCTTACAGACAGTTGCTCATAGTTACCAAACCAACGCAACGAATAACCACGCTCGTGGCTCTCAGATTTAA

Transcript

BRAKERYMET00000006552

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000377 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05270 all species →	AbfB	Alpha-L-arabinofuranosidase B (ABFB) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036195 all species →	Homologous_superfamily	Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily	Interproscan
IPR007934 all species →	Domain	Alpha-L-arabinofuranosidase B, arabinose-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13037 all species →	FORMIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046373 all species →	Biological Process	L-arabinose metabolic process	Interproscan
GO:0046556 all species →	Molecular Function	alpha-L-arabinofuranosidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000006552.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.