Genomic Location: BLFK01000183.1:2185582...2189495
NR annotation: KAJ7360221.1, hypothetical protein OS493_016849 [Desmophyllum pertusum]
Species Astreopora myriophthalma · all data for this species · gene families
| CDS |
| BRAKERYMET00000006561 |
| Transcript |
| BRAKERYMET00000006561 |
| Protein |
| BRAKERYMEP00000006561.1 |
| UniProt accession | Description |
|---|---|
| Q59I44 | 2-haloacrylate reductase OS=Burkholderia sp. OX=36773 GN=caa43 PE=1 SV=1 |
| P38230 | Probable quinone oxidoreductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ZTA1 PE=1 SV=1 |
| O74489 | Probable quinone oxidoreductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=zta1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002392 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00107 all species → | ADH_zinc_N | Zinc-binding dehydrogenase | Domain | Interproscan |
| PF08240 all species → | ADH_N | Alcohol dehydrogenase GroES-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013149 all species → | Domain | Alcohol dehydrogenase-like, C-terminal | Interproscan |
| IPR011032 all species → | Homologous_superfamily | GroES-like superfamily | Interproscan |
| IPR013154 all species → | Domain | Alcohol dehydrogenase-like, N-terminal | Interproscan |
| IPR047618 all species → | Family | Quinone oxidoreductase-like | Interproscan |
| IPR002364 all species → | Conserved_site | Quinone oxidoreductase/zeta-crystallin, conserved site | Interproscan |
| IPR036291 all species → | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR020843 all species → | Domain | Polyketide synthase, enoylreductase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48106 all species → | QUINONE OXIDOREDUCTASE PIG3-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003960 all species → | Molecular Function | NADPH:quinone reductase activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0016651 all species → | Molecular Function | oxidoreductase activity, acting on NAD(P)H | Interproscan |
| GO:0017091 all species → | Molecular Function | mRNA 3'-UTR AU-rich region binding | Interproscan |
| GO:0070402 all species → | Molecular Function | NADPH binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00344 | qor, CRYZ; NADPH:quinone reductase | EC:1.6.5.5 | Enzymes with EC numbers | - | deepkoala |
Genes whose expression across the transcriptome samples of Astreopora myriophthalma tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Astreopora myriophthalma, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
