Gene detail

Detailed information of BRAKERYMEP00000007750.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029193033.2, unconventional myosin-VIIb-like isoform X1 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000007750

ATGTCTGGAAAGCTCACAAACTCTCTGGAACTGAGTGATTTCGACCGCCTACGTAAGGAGAATGCAGTCCTTCGTGACGAGTTAGCTCAATTGAGGGAGGAAATATCCCTTGAGAGACAAACACATGAACAAATGCTGAAAAGTTTTCAAGCTTGTCATAACGAAGATACGAGAAAACTTCGAGAAGAGAAGAAACTCACAGCGAGATTAGCGGAGGAACACGGTGAGTTGCGCTTGGAAATGAAGGAGCTCAGGAAACGATCCACCGCAAGTTCATCAACTCGAGATAGCGAGAAATTGACACTTCACGAAGCCGATCTTGGCGCTCGTTTGTTGAAGGAGCTGACCGTTTTGGGAGAAAGGCTTGGAACGTTACACGACGATTTGTTGTCAAGTTCTATGGCGAAAAGGCTGCATGGAAAACCTACTAGTCATGagGAAGCATTGACAGCCAGGGAGCTCTTAAAGAAACTCAGTGCCGAATTGATCAGTTTGAGATCCTTGTTTGCTGCAAAATTAGGAATTGGACTGAATGGAGTTATACTTTCAGACCACAGAGAAGTTAAGACCAGAGGTATGCCATCAAATTCTCTGAATAAGAGCACAACAAGTCAGTTTTTTGATGACCTAGTTCATGTCCCTGGACCGATTACGGAGGATGCTATTATCAGAGTGCTTCAGCAAAGGAGTTCAGTGGGAGAAAGTCATACAAGTTTGGGTCCAGTGTTGATTGCTGTGAATTCATTTGATCAAGTTCAGTCAAAGACTGGTCCGCTACACAGCCAAAAGCTGCAAACTCTTATCCAAAGTGTAACAAGGAAATTGGCTGCCTCCAGTACTCCACAGGTTATTGTAATAAGTGGCAGTGGAGGAAGTGGGAAAACATTCACTGCTGGGGCCCTTGTACAAGAGCTGCTGGAACAGGCGGCAGGAGGTCTGGATTCCGATATCAGCAAGGGTAACCTGTTTGAGTTTTACGTGTCTGATGGTGTGGTGTCCCGAACAAGAATACAGTGTTTCCTTCTAGATTCTACAAGAGTTGCATGTCCACCCATGAGTGAGAGGAATTATCACATATTTTATCAGCTGTTATATGGAATAACTCAAGAGGAAAGAGTCAAGCTCCACCTGCAAGGATATAGTGTTCAGTCATTGTCGTACCTCAGTAAGTGTTCCATTCCTTACAGTGCGGATGAGGAAGAGTACCAAGCTAAATTTGAGAGTTGGAGGGCTGCTCTGGTGACTTTAGGAATCCCATTTCTAGATGTTTTGAGAGTTCTAGTGGCAATCCTACTGCTTGGGAATGTGGAGTTTGTCGACGGTGAGGGTCCAGAGCTCGAAGTCAAAGGAAACAATGAAATAAAAGCTGTTGCGGCATTGCTTGGAGTGTCAGGTGTATCACTGTATAGAGGCCTGACCACAAAGACCAAGAATGTTAGAGGGCAGATTCTCAGATCACTTTGTGACTCAGCAACAGCCAATTCGAACAGAGATGGCCTTGCTAAGGCACTTTACTGCAGGACAGTTGCCGCCATTATACGCCGAGTGAACAGCTACAAGAGACCTACTAGCATGCCGCCAGCAGCATCACCGGGTGGTTCTCAAGAATCACTGCGAACATCGTCTTTCGGATCTTTGGGGTCACTTGGAAGGAGCACGCAAAATTTTGGGAGTGGCTTGCTAATGATGCCGTTGACAGTCAATGCCCCGTCTTCGCCAGGGTTGGATGGTACTTTCCAGTTCACCAGGGGAGCTGCTGGTCTCATTGGAGTCCTAGAtatgtttggttttgaaaacagTCAGGTAAATCAACTGGAGCAGATTTGTGTGAACCTGTGCTCTGAAACATTGCAGCATTTTTACAACACGCACATATTTAAGAGCACGGATGATTTCGCCAGGGAAGAGGACGTCCATTCTGACCTTGAAGTGGATTATTTTGACAATGCTCCTTGCATTGAGCTTCTTACATGCCAGCGTGCTGGAGTGCTGACCTTGTTGGACAAAGAGAGCTTGTTTGCTCGGGGAAGCTATCAGAATTTCTTACAAAGGGTTAAAGCACAGCACAAAGATAGCGAGTCCTTCTTTGATCCTGACCCTGCTAGTTCCTGTTTTGGAGTGTCACATTATGGTGGAAATAACTGCAATTTCGGCTTTGCAACGCATCTTTTTACTAGCGACTTAAAACCTCAGCAAGGACAGGCCACTGCTCCCAAGGGGGTGCTACACAGGATCTCACCTACCCCGGCGCAAGAGTCGCAAAGCCCCTCGGGATCAATTGATGTACCTCTTAGCACATTTTCCCAAGGATTTCAGGAAAAAGTTGACGTGCTTCTTAAGACCTTGGTCCAGTCTCAGCCGACGTTTGTGCGGTGCATAAAGATCAACGCAAGTGAACAACCACATTACTTTGACCGAGGAATCGTCAGTCAGCAGATTCGAGTGCTGCAGATTTTTGAAACCCTGCAACTTCTCCAGTCAGGCGTTGCTCATCGTTCCCGGTTCCAAGCTTTCGTCCGCAAGTACAGCTTCGTGTCACCTCGTAAGGCGCGAGGTCAGGAGGAGGCTGGGCACGAGGATTGCAAAGCCATCTTGGAAACTCTGATGAGGAAAGTGGGCACATCCAAGGGTGACGTCATGATTGGCTCATGGGTACTGGGCAAGAGATACGTATTCTATAGTGAAATTGTCAAGCAAGAATTAGAAGATCTTCGTGAAGTTCGTCAAGCAAAAGCTGCTGTTACGATCCAGTGCTGGGTTAGAAGGTGGATCTGTCGCAAGAGCTGGCCAAACCTCAAACGATCGCTTGAAATGCAGGCAAAAGGCCGACACGGCAGCAAATTAGACCACAATCATGTTCGGAGGTCGGTGTCTCCGTCGGATGAACTTCGCGTGGACACGAAAACAGCCGAGCAGACTTGCTGCTTGTATGGACTAGACATGGAAACACCCCCGCCTCTACCTAAAAGCCGGCCATACACTGTGATGGGTAATATGAAGATGGGATTCCCACAGACTCGTGTCATGAAAGTCGATTATCCAGACGACGGGAGTGAAGTTATGTTGAAGAAAGGAGAAGCAGTAAAAGTGCTTCGCGCTTCCGAGAAGCGAGGTTATCTTGTTGTTGAGCACAGAAATGCCACTCTTGACTTGCCATTCCAAGTCATGGAGCTCAAGGTACCCACGTTTGTCATCTGCGGCATTCTTAGTTTAATATTGTTTGGGTTTTGA

Transcript

BRAKERYMET00000007750

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9U1M8	Myosin-I heavy chain OS=Dictyostelium discoideum OX=44689 GN=myoI PE=1 SV=1
D3ZJP6	Unconventional myosin-X OS=Rattus norvegicus OX=10116 GN=Myo10 PE=1 SV=1
F8VQB6	Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007274 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00063 all species →	Myosin_head	Myosin head (motor domain)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001609 all species →	Domain	Myosin head, motor domain	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13140 all species →	MYOSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003774 all species →	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016459 all species →	Cellular Component	myosin complex	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0030050 all species →	Biological Process	vesicle transport along actin filament	Interproscan
GO:0031982 all species →	Cellular Component	vesicle	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16677	DACHS; dachs	-	Hippo signaling pathway - fly	ko04391	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.