Gene detail

Detailed information of BRAKERYMEP00000008035.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: KAJ7386773.1, Charged multivesicular body protein 5 [Desmophyllum pertusum]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VVI9	Charged multivesicular body protein 5 OS=Drosophila melanogaster OX=7227 GN=Vps60 PE=1 SV=2
Q7T339	Charged multivesicular body protein 5 OS=Danio rerio OX=7955 GN=chmp5 PE=2 SV=1
Q9FMC5	Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702 GN=VPS60-2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007420 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03357 all species →	Snf7	Snf7	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005024 all species →	Family	Snf7 family	Interproscan
IPR010989 all species →	Homologous_superfamily	SNARE	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22761 all species →	CHARGED MULTIVESICULAR BODY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007034 all species →	Biological Process	vacuolar transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0005771 all species →	Cellular Component	multivesicular body	Interproscan
GO:0006900 all species →	Biological Process	vesicle budding from membrane	Interproscan
GO:0032511 all species →	Biological Process	late endosome to vacuole transport via multivesicular body sorting pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12198	CHMP5, VPS60; charged multivesicular body protein 5	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.