Gene detail

Detailed information of BRAKERYMEP00000008604.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: CAH3106202.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERYMET00000008604

ATGGccagtaataatattattgttaacagTGTTAAATTGTTGGTCTGTACAGGTAGTGACTCAAGTTTGACAAAGAATTGCAGTGACTGCAACAAATCATACAGATCCTGTGATTGCAAGACTTGTTCAAAGTGTGGAACTCTATTTCACAAGTATTGGGGAACCAGCATCGTTAAAGGGAGATCCCATTGCCGAACTTGTTCTTCAGCAGTGTGTATTACCTGTCATGTGGTTATTAACAAGGCTGTTAAGGTGTGTACAAGATGTctaataaaacaaaaggaagatgaaTTGAGCACACAAAAAGCTCTCTCAGCCATTGGAGAGGCAAGAACAGGGCGagCCAATTCCACATCATCTGCAATTACTGATTCATTTGTGGTGGTATCTCCTGTTTCTCACCTATCTCcagagaagaagaaagaatcACTGTTTGAAGCTGCCAAAACAGGGGACCACTACTCCATGGTTACTCTTCTGAATAATAAGGTTGATGTAAATGTGAGAGATGAAGACAAGAATACTCCACTGTTTTTTGCTGCAGAAGGTGGTCATCTACCTTGTGTGGCTCTTTTAATGgaaagAAATGCAGACATAACAGTGGTTAACAATAAGTCATGGACCCCTCTCCATGCACTAGCTTGGAAAGGAGCAAGTGAGAGTCATGTTGAGTGTGGTGAACTCCTTATACAGATGGGGGTTCCTGTGTTTGCCCTTACAGACACATTAGAGACAGCTGCCGACCTTGCAGCTCGCTCTGGTGGCAAGCAGGAATTGGTCCAGCTGCTGAGAGCTGTTGAAGttgatCTAGCAATGCAAAATTTACAAGAGAGGCTCGAGAGCCCTTCAGGGCTGTCTAGCAAAGATCCCATGTTCAAACGGTACGTTGCCACAGTTGTCAGGCACATCACAGAAACTGTTCCACCTAGTGACCCAAAATGGATGACAAAAGACACATTAGAGACAGCTGCCGACCTTGCAGCTCGCTCTGGTGGCAAGCAGGAATTGGTTCAGCTGCTGAGAGCTGTTGAAGttgatCAAGCAATGCAAAATTTACAAGAGAGGCTCGAGAGCCCTTCAGGGCTGTCTAGCAAAGATCCCATGTTCAAACGGTACGTTGCCACAGTTGTCAGGCACATCACAGAAACTGTTCCACCCAGTGGCCCAAAATGGATGACAAAAGATAGCCAACAGCAAAAGCTTCGACCATTCAAGACACCAGAACTCTTAAGAAGAGAGGAGAAAACTAAATCCTGTGATTGGGGCCTTCGAAAACACTACTCGTGTGAAGAGCTGAGATCCGAAACAACCGGTACAGTACCTCGATTATTCGGAACAAGTTCTCCATCAGCCAGCATTCCTACAGTGGATGTGGAGGCAATAGTCAGACCAGATTTATTGCCGTCTGTTTTAGTGAATCCCTCAAAACTCGAGGAAAAGCTGATGAATTGTCAGGCGGAGAAAGAAGATCTGGAACAGCGCTGCAAGAGGCTCATGCAATCGATCGCCAGTGCAGCGGAGGCGCACAATAAAGAGGTTACAAGATTGCAGCAGGAATTAGACATCGCAAGAGAACAGAAGGACATGGCCGTAAAACGGTGCGAAGCAACGTTTGTaaataaaatggcaaaaattCGCCAAGAAACAGAAGCATCCATTCATGAAGCAAATGCACGGCTTGAGCAAGCGGAGAAGGACCGGACCGAGGTGTTGCATTTACAGAACACTTTCAGGCTATCTTGGGTCCCGGATGAGCTTGTCAACTACTGCTCTAACACCAAATGCCGAGCTCCTTTCACACAAACGCGAAGACGCCATCATTGCCGATGCTGTGGCCGCGTTTTCTGTCACAACTGCACAGGCCAGTCAGCTCCGATTCCAGCGTTTGGGTATGATCAGCTTGTCCGAGTATGCAAtccttgctttgctttgttggACGAAATGTTCTGCGATGAACCGACTGGTTTTAAAGATCCCACGTGA

Transcript

BRAKERYMET00000008604

Protein

Uniprot

Uniprot term	Description
Q9TZD0	Lateral signaling target protein 2 OS=Caenorhabditis elegans OX=6239 GN=lst-2 PE=2 SV=2
A8XJZ8	Lateral signaling target protein 2 OS=Caenorhabditis briggsae OX=6238 GN=lst-2 PE=3 SV=1
Q960X8	Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Drosophila melanogaster OX=7227 GN=Hrs PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01363	FYVE	FYVE zinc finger	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR000306	Domain	FYVE zinc finger	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR017455	Domain	Zinc finger, FYVE-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24161	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01534	zntA; Zn2+/Cd2+-exporting ATPase	EC:7.2.2.12 EC:7.2.2.21	Enzymes with EC numbers	-	deepkoala