Gene detail

Detailed information of BRAKERYMEP00000009220.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044177545.1, transformation/transcription domain-associated protein-like [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000009220

GGCCTGGAGCTCATTGAGTCAACGAACCTGAAGTATTTCTCCAAAGAAATGACCGCCGAGTTCTTTGCTTTGAAAGGAATGTTCCTGGCTCATATTGGAAGGTCTGAGGATGCCAACAAAGCCTTCTCTCAAGCGGTGCAGATGCACGACTCGCTGGTCATGGCCTGGGCTTTGTGGGGAGACTACCTCGACGGGCTCTTTGTACTGGAAAGGAACATGCAGCTGGGCGTATCCGCCGTTGTCTGCTATCTTCACGCCTGTAGGCATCAAAACGAGGCCAAGTGCAGGAAGTACCTGGCGCGGACCATTTGGTTGATGACGTATGATGATGAAAAGGGATGCATATCTGAGGCAGTGGACAAATACTGCGTTGGTGTTCCGCCAGTTCACTGGCTGCCTTGGATTCCTCAACTGTTAACATGTTTGGTGCGACGCGAGGGTCAAAAGATTTTGAATCTTTTGTGTAACATCGGACGAGTTCATCCTCAAGCGATGTACTTTCCGATCAGAACGCTCTATTTGACATGGAAGATTGAACAGCGAGAGAGAcATAAGATGGAGGCAGCTGCAGCGGGCATTACCAGTCAGCGTTTATCCACTGGAGGCGTCAACACTCCAACAAGTGCAGAATCACAAAATGCAACCCCAGGTTCTTCTAAAGCAAGTATAATAGGTTCGGAAACTGGACAAACCAGTGCAACAGCCTCCTCAACAGCTAACGTTAAAACTGCCGTTGGTCCAACGGCTGTCGTCTCTGCTGCACTTGAAAACTTAGCAGGCTCAAAAGCAATGAGTACAtcTGCACCATCGACGCCCACCAACACATCTACACCAACAACGCCTACTCAAACGGTTAATACCACTGAAAAGACTCTGGCATCTCCCGTGGGCGCAGCTGCAAGCTCAGGGACCGCTGGTTCTGGTTCGTCAGGCGGCACAGGCACACCCCAGGCCACAGGATCTGCTTCCGCCGCCAATCAGAGCGACCCTGGAGCTATTCGCGCCACGGCTCAGATGTGGCGATGCAGTAAGATCATGCACCTTCTTAGGGACCTCCATCCTACTCTTCTCTCGGCCCTTGAAGGTGTCGTAGATCAGATGGTTTGGTTCAGAGAGTGCTGGCACGAAGAAGTTCTGAGGCAGCTCCGTCAAGGACTCACGAAGTGTTATCAGGTGGCTTTCGAGACCAGAGGAGatgtTGCCGCCGCTCGTATCACTCCGCACACGTTAAGCTTTGTGAAGAAGCTAGTGAGCACATTTGGGATCGGATTTGAGTCGGCCTCCAGTGTTTCAAGCACCTTCTCGTCAGCTGCTTCCGAGTCCCTCGCTAGAAGAGCTCAGGCGACTGCTCAAGATCCGGTGTTCCAGAGACTGAAGGAACAGTTCGCGATCGATTTTGACTTTAGTCAACCAGGGTCCATGTGCCTGCATAATCTGATTGGTAAACTGAAGAAGTGGATCAAGATACTTGAGGAGAAAGCAAAACTTCTACCGAATTCGTTTTTATTGGAGGAGAGATGTCGCTTCCTCAGCAACTTCACTACATCCACAGCAGAAGTGGAACTTCCTGGCGAGTTTCTCATGCCAAAGGCAAATACGCACAGTCCCTATTACATCAGAATCGCTCGGTTTATGCCGCGAGTGGAACTTGTTCAGAAACACAACTTTTCTGCCAGGAGACTGTACATCCGGGGTAACAATGGCAAGATTTACCCTTACCTTGTGGTGAATGACGCTTGCATGACGGAATCAAGAAGAGAGGAGAGGATCCTGCAACTTTTGAGGCTTCTGAATCTATACCTTGAAAAGAGGAAGgaatctTGCAAAAGACATCTGTTATTCACTGTACCACGTGTTGTTGCCGTGTCGCCTCAGATGAGACTCATTGAGGATAACCCGTCTTTCATTTCACTCAGGGAGATCCTAACTGAGTGTTGCAGTAAAAAACACGTGGAATCAGACGCGCCAATAGCCTTGTACTACGAGCGCCTCGCTTCCGTGCAATCGCGTGGCTGTCAGGTGACTCACCAAGTACTGAAGGACATTCTGAGAGAGGTGCAACTCACATTGGTACCAGAGATTCTTCTAAAGGAGTGGGCGCAATACACGTACCAGGACCCATCGGATTACTGGACCTTCAGAAAACAGCTCTCTGTCCAAGTGGCGCTGTCAGGTTTCGCCGAGTTCATCTTGCATCTTACGAGACTAGGACCGGAAATGCTTCAAATCGCGCAGGACTCGGGCAGACTAACTGTCTCGTACAGTCGCTTTGAAGTTGACGATTCCAAAGGTGAACTGGACGCGAACCGTCCTGTGCCTTTCCGACTGACTCCGAACATTGCTGAGTTCGTGACACCAGTCGGCGTGAATGGTGTAATGACGGCGGCTATCGTGTCAGCTGCGCGCTGCTTAGCGGAGCCTCACTTCAGTGTGCAGAGTATTCTGAGGGCTGTGTTGCGAGATGAGATGATCGCTTGGCATAAAAAGAGACAAGACGAGACTCACGCCCTCCCCCTGAGTAATCCGCCCACGGACATGGATAGTGAGCTGTTGATTAGGCTTGTGAAGGGAGCTGTGACCGCCATCATGACGAGGCTACAAAACCTAGCTCAGTATGAAGGCGGCGAATCCAAAGTTACCACACTGATAGCTGCATCTACCAGCCCCGATAACTTGTGTCGCATGGATCCTGCTTGGCATCCATGGCTGTGA

Transcript

BRAKERYMET00000009220

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80YV3	Transformation/transcription domain-associated protein OS=Mus musculus OX=10090 GN=Trrap PE=1 SV=2
A0A0R4ITC5	Transformation/transcription domain-associated protein OS=Danio rerio OX=7955 GN=trrap PE=3 SV=1
Q9Y4A5	Transformation/transcription domain-associated protein OS=Homo sapiens OX=9606 GN=TRRAP PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001665 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02259 all species →	FAT	FAT domain	Repeat	Interproscan
PF02260 all species →	FATC	FATC domain	Family	Interproscan
PF00454 all species →	PI3_PI4_kinase	Phosphatidylinositol 3- and 4-kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003152 all species →	Domain	FATC domain	Interproscan
IPR000403 all species →	Domain	Phosphatidylinositol 3-/4-kinase, catalytic domain	Interproscan
IPR003151 all species →	Domain	PIK-related kinase, FAT	Interproscan
IPR014009 all species →	Domain	PIK-related kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050517 all species →	Family	DNA Damage Response and Repair Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11139 all species →	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000124 all species →	Cellular Component	SAGA complex	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0035267 all species →	Cellular Component	NuA4 histone acetyltransferase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000009220.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.