Gene detail

Detailed information of BRAKERYMEP00000009943.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029186324.2, LOW QUALITY PROTEIN: GON-4-like protein [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000009943

ATGGCGGCCGAGGAAATCATCACAGACAAAACCGTGAGCCTAGTGTATCAGAGAGCCTGCAATTCACGAGGATGGGTGAATTCCCGTTCAAACGAGATAAAACTAGAGTTGGCGCGGGGTGAAGAAAAACCCTTTGATGAAGTTATAAACCTATTTGGAGACCCTCATGCATTTGGGCAGCAGCCCATTACATCTATGAGACAGtttCTGTCATGTCTCCTTTGTCCACATTTCCTTGATGACCCAAGCTACCCGCAAGATGTCAAAGAAAACGCTCGAAGGATCCTCAAAGCGAAGAAGGGGTTTGCTATCAGTTCTTACACAGAATCATTGGGATTAAGAATAATTCGTGAAGATGTTGCCCAGTTCATTTCCAGAAGAGACGGTTACTCGGCTGACCCTGAAGACATCATTTTAACGAGCGGAGGAGCATTTGGAATAAGGGTGTGTGGTACTGGTTCACCTACAAAGTGTGAAGGTCAGGAAAATGTACGGCTTTTTAGTAGTGAGCAGCTGGAGACACTAAATGAACAACTACAACAGCATACGCAGCTCCTGACTCAAATGTATCTGATGGCACGGGAAGATGACAGCCTGAGTAAGGAAGCAGAGCTGACTCGCGATTATGTCATTGAGCTGAAAGGTTTCCAGGAGCGAGCGTCTAATGCGCAGCTTTTCAGGGGACTGGGTGACGGCAGGGTACATGCCTCGGCATTCAGCTTTCCGGGACTTGAACAAGCTGTCGAAATTGCTGAGAGCGGTTTTGTTCGTAAAAGACGAACACCCAGCCCACGAAAATGCACCACGCCTAAAAAAGACCCTAAAGCTTCGACGAAAACACCAAGACGCACCAAACGCTCGGATGACGATCTGCTGCCTCCGCTTTCAGACACAAACATACAACTAATTGCGACAAACAAAAGTGTTTTCCAGTTTGTGGAGCTGCTGCCTCATCACAGTTTACTGCCGAGAACAGGAGACACGCCCAAGCAGCTTAATGGACTCAGGGTGAAGTTCTCTGATGCCGAGGATAATCTTCTGGCTCTGGGAATGAAACAGCTGGGAAAGAAGTGGGAACTTATCCAAGAACATCTACTGCCTGTAAAGAGTCCGAAACAGCTTCAAATACGCTGCAAGAATCTGTTGTCAGCTCGTGCACCTGAGAACATTATTAAGTACTACCGCAGGAATAAAGAGCTCTGGGCGTTACCTACAGCAGTTTCTTCTGAATTTGTTGGTTGGCGAGCTCGAGGCAGAGAATCACTGGAGCCGCTTTGGCtgcaaaattataaaaagcgTCAAAAGGAACGGCGTGAAAGTCAAGAGAAAAGTGAAGGTCTTGCTGTACAGCAGGCAGTAGAGAGCGCGGCGTACGGCCGGCCGATTGCACCCAAGTTAAGTGGAGCAACGTGTGCTGTGGCTTTACCAAGCGGTGCAGCTCACGGTGAACAGGCAACAGTAACTTGGGTTGCTATAGCAACCAGAACTAGCCCGTGGAAAGCTGTTACCACAACACAGTCAAGTGACGTTTTGCGTGAGGCGGAGAACGCTCAGAGTACAGGCAACCCGACCATTACACCTGCTGCCGATGGAAATCGAGCTCAAGCATTCGCAGAAGGATATCTCGCCAAAGTAAAGAAACAACTTTCCAGTGATTCTGAAACATACGAGGAATTTTTGCAAACACTAGCAATGTCCTCTGAGGAAGAATGCTCTCCAGTAGAGTTGTACAAAAGAGTTGAAGTTGTGTTGGCTGAATATCCGGATCTTGTAGAAGGATTTGTTGGGTTTTTGGAGCCTCACCAAGCGGTCCAAGCGGGGGTGTTTATGGCAAACCAGGAATTTGTGCGAGCTAGAACATTCCTGAGAAAACTGGAGGTTCACTTCCAACGGAGTCCGTCCCAATTCAGAAAGATAATCAATGCCTTCAATTCTTGGAATAAAAAAGCCGTCAAAGACCCTCTCGAGTTACGACAGACCATCGTTCCAATGTTGAAAGGGCAGCTACACCTGATTGATGAATTTTACTCGTTCTTTGAGGACTTGAAGCCTCCTGTGTGTTCTGACGATGATTTCGAAGAAGTTGATTTCGGAAGTGGTAGCGAACCAGAGgTGGATGATTTTGAAGAGGTAGTCATTCCATGCTTCGTGGAACCTAAGAAAATCAAAGGTAGACCAGCCTCACAGAAAGACTCACAAAAACACAACGCAAAAAAGGGCAAAAGGCCGTGCTCAGCTGGCAAGCCAGCAAAACAACAGGCAAGTACTACCAAGTCATTAGGAAACAGAACTAAAACAAAAGCCGCCTTGAGCAGACCGAGCGCCCAACAAGAAACCCACCCAGGGAGGAGTCGGAGAGAAATTGCGGGGAAAAATGCAAGGGGTGTCCCTGATATTCAAACAAGCACAGAAGCCATCACGGAGGAAAGTACACTGGATGATCAGAGAACAGAGGCTGCTTCACTAGAAGGACCTCTTTCAGCGTCAACATCATTGCAATCAGAAATCAGTAATGATAGTTACCGAGGAGAAGAGTTGAATGCGGCCCCAGTGGACACTTTAAAAATCGAACATGAAGGACCCGAGAGAAGAAACTCGGATAGTGAGGAACAGGAGGATGATGGGAATTCTGACATTGAGCATGATGGGTATGAcgaggatgatgatgacgatgatgcaGATGGCGAAGGTGTTGATTACATGGATGACAATGACGTAGAATGTGACATAGTCGGTGACGTCAAAAGTGCCACTGATACAGAGACCAGTGGCTGTGATAGCGATGCAAATGTACTGTCAGCGGTTGCTGTGCCTGCGAAAAACCTTCAGCGGAGTCAAGATGGTCAAGTGGTACTTTCGTGGACAAGACAGGATGACCGGACCATTTTAGAAGCTTGTCAAAAGATGGGTGCCAAATCAGAAACATTCCAACATATAGCAAACGGTctggaaaataaaacagcaGACGAGGTCAAAAAGCGTTTTATGGATCTGTTATGTCTTTTCAAAGCTAGTAGCGGAGAAAGAACGAGAGAATCGACAAACGAGGAGTCTTGCAGTGAGGAGGACGATGAAGACGGCAGCGAAACTGTTGGCGAATCAGAAGGAGAACAGCCCCGTGACTAA

Transcript

BRAKERYMET00000009943

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BGT5	Alanine aminotransferase 2 OS=Mus musculus OX=10090 GN=Gpt2 PE=1 SV=1
Q8TD30	Alanine aminotransferase 2 OS=Homo sapiens OX=9606 GN=GPT2 PE=1 SV=1
Q3T8J9	GON-4-like protein OS=Homo sapiens OX=9606 GN=GON4L PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003296 (this species only)
Transcription factor family	MYB · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02671 all species →	PAH	Paired amphipathic helix repeat	Repeat	Interproscan
PF13921 all species →	Myb_DNA-bind_6	Myb-like DNA-binding domain	Domain	Interproscan
PF21227 all species →	Myb_DNA-binding_7	Myb-like DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003822 all species →	Repeat	Paired amphipathic helix	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR052435 all species →	Family	YY1-Associated Transcriptional Regulator	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR036600 all species →	Homologous_superfamily	Paired amphipathic helix superfamily	Interproscan
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16088 all species →	YY1 ASSOCIATED PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000009943.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.