Genomic Location: not available for this species
NR annotation: XP_020605252.1, complement C1q subcomponent subunit C-like isoform X3 [Orbicella faveolata]
Species Astreopora myriophthalma · all data for this species · gene families
| CDS |
| BRAKERYMET00000010206 |
| Transcript |
| BRAKERYMET00000010206 |
| Protein |
| BRAKERYMEP00000010206.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000499 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 all species → | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF00229 all species → | TNF | TNF(Tumour Necrosis Factor) family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008983 all species → | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| IPR021184 all species → | Conserved_site | Tumour necrosis factor, conserved site | Interproscan |
| IPR050149 all species → | Family | Collagen superfamily | Interproscan |
| IPR006052 all species → | Domain | Tumour necrosis factor domain | Interproscan |
| IPR008160 all species → | Repeat | Collagen triple helix repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 all species → | COLLAGEN ALPHA | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0031012 all species → | Cellular Component | extracellular matrix | Interproscan |
| GO:0005164 all species → | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0006955 all species → | Biological Process | immune response | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
BRAKERYMEP00000010206.1.
