Genomic Location: BLFK01000297.1:1109852...1115829
NR annotation: CAH3036230.1, unnamed protein product [Porites lobata]
Species Astreopora myriophthalma · all data for this species · gene families
| CDS |
| BRAKERYMET00000010599 |
| Transcript |
| BRAKERYMET00000010599 |
| Protein |
| BRAKERYMEP00000010599.1 |
| UniProt accession | Description |
|---|---|
| Q9NPF5 | DNA methyltransferase 1-associated protein 1 OS=Homo sapiens OX=9606 GN=DMAP1 PE=1 SV=1 |
| Q9JI44 | DNA methyltransferase 1-associated protein 1 OS=Mus musculus OX=10090 GN=Dmap1 PE=1 SV=1 |
| Q7K3D8 | DNA methyltransferase 1-associated protein 1 OS=Drosophila melanogaster OX=7227 GN=DMAP1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005095 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16282 all species → | SANT_DAMP1_like | SANT/Myb-like domain of DAMP1 | Domain | Interproscan |
| PF05499 all species → | DMAP1 | DNA methyltransferase 1-associated protein 1 (DMAP1) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR032563 all species → | Domain | DAMP1, SANT/Myb-like domain | Interproscan |
| IPR008468 all species → | Domain | DNA methyltransferase 1-associated 1 | Interproscan |
| IPR027109 all species → | Family | SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12855 all species → | DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0045892 all species → | Biological Process | negative regulation of DNA-templated transcription | Interproscan |
| GO:0000122 all species → | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0000812 all species → | Cellular Component | Swr1 complex | Interproscan |
| GO:0003714 all species → | Molecular Function | transcription corepressor activity | Interproscan |
| GO:0004402 all species → | Molecular Function | histone acetyltransferase activity | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0006338 all species → | Biological Process | chromatin remodeling | Interproscan |
| GO:0035267 all species → | Cellular Component | NuA4 histone acetyltransferase complex | Interproscan |
| GO:0043486 all species → | Biological Process | obsolete histone exchange | Interproscan |
| GO:0043967 all species → | Biological Process | obsolete histone H4 acetylation | Interproscan |
| GO:0043968 all species → | Biological Process | obsolete histone H2A acetylation | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K11324 | DMAP1, SWC4, EAF2; DNA methyltransferase 1-associated protein 1 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Genes whose expression across the transcriptome samples of Astreopora myriophthalma tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Astreopora myriophthalma, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
