Detailed information of BRAKERYMEP00000010968.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3156022.1, unnamed protein product [Porites lobata]
Species Astreopora myriophthalma · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4R4F8Survival motor neuron protein OS=Macaca fascicularis OX=9541 GN=SMN1 PE=2 SV=1
Q8HYB8Survival of motor neuron protein OS=Felis catus OX=9685 GN=SMN1 PE=2 SV=1
O18870Survival motor neuron protein OS=Bos taurus OX=9913 GN=SMN1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005653 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20636
all species →
SMN_G2-BDSurvival Motor Neuron, Gemin2-binding domainDomainInterproscan
PF06003
all species →
SMN_TudorSurvival motor neuron protein (SMN), Tudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010304
all species →
DomainSurvival motor neuron, Tudor domainInterproscan
IPR002999
all species →
DomainTudor domainInterproscan
IPR047298
all species →
DomainSurvival motor neuron protein, Tudor domain, eumetazoaInterproscan
IPR040424
all species →
FamilySMN complex subunit Smn1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR39267
all species →
SURVIVAL MOTOR NEURON-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006397
all species →
Biological ProcessmRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERYMEP00000010968.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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