Gene detail

Detailed information of BRAKERYMEP00000011160.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029186038.2, CST complex subunit CTC1-like isoform X1 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000011160

ATGGAAGTATTCTTGAGACGGTGCAAGAATGAATTCTGCCTCGGGCTGGTGCGAAATGAAAAGGAGTGGCTGAAGTCATTTTATTACGATGTGGAGAAAGGTCTTCGTCAAAATGAGAGTGACGGTGAATTCGTCGAAGTTTGCTTGCGCGCATTGCACCAGATCAAGCGTGCGAGGTACATGGATGAAATGCAAGACTCCTCCGTCTCCTGGTGGCTTCCTCTCGAGCAAAAAGTCGTGTCACTTGATCTGTTCCTGAGAGAACACCAAGATGTGTTTGGAGGCTCCATCTTTGGCAGGGAGTCCTTTGTGGAAAGCTCGTTAGGTTACAGCCCTGTTGCCAAGAGCTCATGTATTCTACTTGGATATCTGACTCTAAAACCCAAGTCTTTAAAGGGCACTGCAGGAACAGGGACTCTGTATGTGGAAGACAACCTTGGTGCAGTATTGTGTGAGatcGCAAATCCTGTCAAATATCACATTGATAAGTTGGTTTTGATCTCCGACTGGAATTATGTTCCTTCAAGTGTTTTGACATCTTTAAACACTGCCCAAAAGTCTAAATGTGTGGATCTGAAAGAGGGCCGTGCAGGTTACATTGAGGTCATTGGTGAATGTGTGCCGATTTTGATGGTAACAAGGAGCAGATACAATGACAAACCACTCGAGTTTTTAACCATCCAAGACTTTCAGCAGGATGTAATgccCACTGATAACTTTAACATCTgtggaaacatttttgccttgaGTCCAGTACACAGcATGAGTGTTGGGAAACCATTCTTTTTGGTGAAACTTTCCTGTCCAGACACAAATCTTACAACTGCTGTTGTAGTACAGGGTGAACAATTTATGGTCTGGCATAATTTCCTGCAAATCGATGAGTCATATGTTTTCCAAAACCTCAGACAAACTACAATGAATAAGGGAACAAGGAATGAGAGAAAAATTCTTGCCACGACTCGCCATTCTGACTTCCAGAAATATCAGTCAGGTGTATCAGTGAGGATATCAAATAAAAAACGACTGTGTGAAGAGGATAAGtcagtcagttgcTGGATCATCCACCTGTCAGCTCAATCAGTCTGTCTGGCAGGTGGCACTCAAGCAACAGAATCGAAACGCCTGAAAGTAGAAAATGAGCAAGATATCTTGAAGCCAACAAACAAAGAGAGTCATGATGCAGTCTTGCAAAGTGCAGAAGCGTGCCACACAGACATGCCATCATTAAAACCAAAGGCACCCAGCAACATGTCTTACACAGGTGTGATCACAAAATGCATCAAACCTGAAGCTGGAGTTTATGAACTGGACGGAAAAATAAGATTGTACATTAATCATCAGCCTTGTTCTAACGTGGCACGTGGCCTGCGCCTCGGTGCTCGGGTGACTGTTCACAATGTTCATTTATGCCGGAATGGGAAGAGAgttcttggattctgttgttgCACTCAGAGCACTGTGCGTGTGATCAAGTTCTCACCCTTGATGTCACCTTGGAAGCCTTTCAGTCCTTGTGAAAGTCCTTTGGCTCTGTTGGGACAGAATCTAACTCTTTCTGATTATGTGGACTTGCTGGAAATGTGCGACAAAGTTCTTGAGAAATGTTCACCCCTTTACAGGACTAGCCAGCTGGTCGCCTACTCTGCCAGCCAAAAAAGTAAGATGACAACTTGCACCCAAGACAAAGAGGACTGGATGTACAAGGTTCTTACTCAAGATTGCTTCAGCCGACCTTTGATACTTGTCGGTTGTCTCCGAAATTCAACAAAGACTGGCCAATTACTTCTGTTCGATCAAACGGGAGAAATCGGCTGTATGGTAGCACCCGCTGGAGGCCACATATGCGCAAGAGATTGCTGCAAGAAAGTCGTTACAAAGGAAGAAGCTTCAAAGTGTCCGTGCATGCAGATAGGGCATTTGGACTCATTGATTCAAATCAATAAGTTTGAAGTAGTCATCGAGAAATTCAAGTCTAGTAATTTTCTGCATGAGAATTTTACCGCAGATTCAACTCGCACATATCTTCAATTTTCGTTTGACAATGCCGAAATTTTAACACCTGAAGGCACTGGCAAGAAAGCGGAAAGTTGGCGTGACGAAAGAAATCCTgaaatcaagaaagaaaaaactatAACTCGCGAAAAGGAGCAAGGATTGGATAAAAAGCCCCAAGAAGTTGGCAACATGAAAAATCATGCTTTTGTGTGCAGGATTGTGTTTATGGTAAGAAACTGCGAAGTTCCCACCCTCCGGAAAGTAAAAGAAGAGCTATGCTACCCTTGTGgtgttgaaataaaaattgtcgCAGTTTGTAGCGGAGAAAATCAAGAGTCCTCTGCAAACAACAGCACCACCTCCGGGGAAATTACCGTGTGCTGTTCAAGGTCTCGCCACTTTCTTTCTGGTTTTCAGCTTCAACGAAAAAATGCCGCGTTAAAACTGGTGAAGAGAAGTTTGTGTTGGTCCCATGCTCTACATCCGGGTTGTTTATATGTCATCACGGAAACTGTGCCAAACAAAGCAAGCTCCCGGATCTTGAAAGATGGCGGAAACTTAGAGCCATTGATTAATGTTAGCACTGACATGCAGCTGGAAAGAGTTTGCTGCTGTGAAACCTGTGATCTTGCTGGGCCGTTAACGGACACTGAAATAAACGCAGGAATTGTCAAAGCCCTAGATGAGTTGAGAGACGATTTTTTTGGAAATGATAAATTGTGTTGTGTAGATACTGTTCTTGGGGATAACACTCAGCTGAAAAGGGAAAACGGGACCGCTTCTTTGCAAACGCGGTGTTCCCCAGGCGCTCAAGTCAGTTTCCGAGGTGTTATCGTTAGTCGAGAGCTGCGGCAATCGGACACTCCTAGTCATCGACTACCCAATGGACTCGTCGAGGTGCCGAAATTTGGCCCCGTCAAGTCAACGGTGATTAAAGACCTGCAGCTTGGCTTTACTCTGCTGACAAATAACATCATTCAACTGAGAGTTAGAGACCTACAGTCGCCCAACACAATCTCTGTGTATCTAGATTTGAGGAGAACAAATTACATTTGCGGGTTACTACCTGgcGCCACTGTCCAGTTCCGAAGGTTTGTGAGAAAATTCTCACGCTCCAGGAACATGTATTGCACATTCGAGGCTTGTTCGTCGGTTGTCGTGGAAAGACGAGCGCTTCCGACTTTCACCGAAGGTCCGTTCAATCCAGGATCGTCAGTGAACCTCTCAGTATCGACGTTGGCCGCAGAAAATACGAAGCAGCCTCCAAATCGACATCTCGTCGAGCTTATTCAGAGCGAAGCTGAAGGAAATTTTGTCCAGACCATCTCGCGGGTGCGTTGTCGAGTAACCGTTGTGCAGAAGGCGAGCCTGCGATGGTTATGTAAGCGTTGTGGTGAGTTAGTAACAAGAAATGAATGCACGGGTGGCTGCTTCAGTTCAGTGGGATACAAGTTTAAAGCAGAAGCAAGATGTGTGGTGGAAGACGGGACAGGAGAGGGTCAAATCTATGTTTATGATGATTTGGTGCCCACGGTATTGAAGGTCTCTCGTCAGCAGTGGCTCAATCTTCAGGACTTAGCCATGCGCAATGGAGAGCTACTGTACCAGCGCTTTTGGCGTGGTGCAAGCAGCCACCCGCAGctcAACCAAGGGTATCTAACCTCTTCCAGAGAAGCAGACGCTAAGAAGACTTTAGAGAATTACTGTTGTTCACCACAGCTTCAGCGGCTTATCGTTTTAAACTGCAAATTATTCCGTTTCAGCAAGACTGTAGCTGACAAAACAGAGCAGGggTACGAGACCCGCAGTATCAACATTGGTGGAACAGAGTACAGTACCCTCGTTCTGCCAAAACTGCTCTTAAGAGCAGAATCAATCTCTGAAGTTCGAGCAGTGGATGAAATACGTCGTCTTCTTCAAGTAGTCCAGGCCGCAATGTAA

Transcript

BRAKERYMET00000011160

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0JMF1	CST complex subunit CTC1 OS=Danio rerio OX=7955 GN=ctc1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003958 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15489 all species →	CTC1	CST, telomere maintenance, complex subunit CTC1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042617 all species →	Family	CST complex subunit CTC1-like	Interproscan
IPR029156 all species →	Family	CST complex subunit CTC1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14865 all species →	CST COMPLEX SUBUNIT CTC1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0010833 all species →	Biological Process	telomere maintenance via telomere lengthening	Interproscan
GO:0042162 all species →	Molecular Function	telomeric DNA binding	Interproscan
GO:0045740 all species →	Biological Process	positive regulation of DNA replication	Interproscan
GO:1990879 all species →	Cellular Component	CST complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000011160.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.