Detailed information of BRAKERYMEP00000011606.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3187059.1, unnamed protein product [Porites evermanni]
Species Astreopora myriophthalma · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008072 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR050831
all species →		FamilyCarcinoembryonic antigen-related cell adhesionInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44427
all species →		CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19Interproscan

 Gene Ontology
No Gene Ontology signature was detected for BRAKERYMEP00000011606.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERYMEP00000011606.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP