Gene detail

Detailed information of BRAKERYMEP00000012516.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_029206417.2, cGMP-specific 3',5'-cyclic phosphodiesterase-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERYMET00000012516

ATGACAAACGTCGCGGAATTGAGCAAGGATCTGGTCGAAAAATATCTTGATGAACACTGTGACTTTACGAAGAGCTACTTTCAACGAAAGGCCACCTCTGCCATGGTTGACAACTGGATGAGCAGTAGATCGCATCAACCTGGATCACGAGCTATGCAAGTTAGCCATCTCCAAAGAGACAGCACCAAGACTCACACCATTCTAAAACCCGATGGCGACTTTAACGATGGTAGACTTAATTCCATATTCGGGCTCGGAAGCGAAGGGAGGAGACAAAATTCCCCGCGCCGAAAATCTACACTTGCAGAATTGGACGAGAAAGAAGTTTTTATGGAATTAATCAGAGACATCGCGAACGAGCTGGACATAAATATGCTGAGTCACAAAATCCTTGTTAACGTCAGTATACTAACAAATGCGGACCGTTGCTCTCTGTTTCTCGTACGCGGCTCTCGTGAAAATAAGGTTCTTGTATCTAAGCTCTTCGATGTGACTTCCGAATCCACGCTGGATCAGTCAATAAGGTCCGAAGAGGATGAAATTTGTGTCCCTATGGGGGTTGGCATCGCCGGTCACACTGCAGCAACCGGTGAAACCATCAACATAAAAGACGCATATTCGGATCCTCGTTTTAACGCTGAAATCGATAAGGCCACTGGATATAAGACTCACAGTATTTTGTGCATGCCAGTTAAAAGCCATGATGGAGAGGTGATCGGAGTCGCACAGATCATCAACAAGATTTCAGGAAAACATCAATTTACGGAAAAAGACGAAGAGGTTTTTAAGAATTATCTCACGTTCTGTGGAATTGGGATTACAAATGCTCAACTCTTTGAAATCTCTGTACAAGAATACCAAAGAAACCAGATTCTCCTTCAACTTGCAAGCAGAATATTTGAAGAGCAAAGTAACCTTGACACATGTGTCCACAACATCATGGCAGAATCACTGGAATTGCTCGATGTTCAACGCTGCATCGTGTTCCTAATTGACGAGTCTTGTGAAGGCCAAGATGTGATCTTCTCCAAGGGTTTTGATCTGCACTCTCGAGATGTTCAGGGAAATAGTGGAGAAACAACTCATACTCACTGGTCAATGAACACAGGCATTGCAGGATTAGTGGCATCCACTGGAAAGGCTGTTAACATCCCTGATGCTTATGCTGATAGTCGCTTTAATCCAGAGGCAGATGTTGAAAGTGATTTTAAAACCACATCTATTCTTTGCATGCCAATCTTTGACCGAGGTCAAAAGGTTGTAGGGCGTGACACAAAGGAACATGACACAAACCTGGAGGCGCTCCTAAAGAAAAGTCGCGAAAAGAATGTCACGttcaacaaaggaaaatgcgaATTCAACAAAGAACGCGTAGTCTATTACGGCTTAATGTTCTCAAAAGAGGGAGTATCCCCAGACCCTCGTAAGGTACAGGCTATCAAGGAGGCGGGCCGCCCAAGGAATGCAGCGGAACGTAACTCTTTTCTGGGCACAGTCAGATATAGTTCACGGCTTATGGAAGTCAGCAAGTATCAGAAAGCAGTCTGCAAACTCTGGGAGTTAGTAAAAGGGAAATTTGAATGGATGCAAGAGCACACGGGAGCATTTGAAGAACTCAAGAACATGCTCAGTAGTGAAACGGTACAAGCCTACTTCGATCCCCAAGGGGAACACGAGCTCCACGTGGACGGGTGTCCGATGGGACTGGCAGCCACTCTCACGCAGAGGAAGCCTGGAGAGCAAGTGTGGCAAGTTGTGCAGTACTCTAGTCGAAGCCTCACAGGCACAGAAAAACGGTACAGCCAGATCGAGCTAGAAGCCTTAGCGGGTGTTGCGCAGTTGCTGAATAAGAGCAATGGTAAACCATTCACTCAGAGTGATGAAAATCTGTTTGAGGCATTTGCCATCTTCTGTGGCCTTGGAATTCACAATGCACTGATGTATGATCAAGCATGCAAGTTGCTGGCCAAACAGTCTGTGGCTATGGAGGTTTTGTCGTATCATGCCTCAGCCCAGCAAGGAGAAGTTGACAAGATAATGaaacaaaagattgaaagtgcGGATCATTTCAAGTTGTGCACATTTGAGTTCAATGATTTTGATTTGACTGATGATGAAACCGTTATGGCATCAATACGAATAATGCTTGAGCTTGATTTTATGAATGCTGTTCACGCCAAACAAGAGACCGTGTGTCGTTGGTTGATGAGTGTCAAAAAGAATTATAGGCCTGTTATTTATCATAACTGGAGACATGCTTTCAATGTGGCGCAGAGTATGTTTACAATGCTTACGACTGGTAACATGAGGAGATTTTTCGGCGATCTGGAGGTGTTTGCCTTAATAGTGGCTTGCTATTGTCATGATCTGGATCATCGCGGTACCAACAATGCTTTTCAAACCAAGACGGAATCTCCGCTGGCTCAACTCTATGGAACCTCAACTATGGAACACCATCACTTTGATCACTCAATCATGATCCTCAATTCAGAGGGAAACAACATATTCGAGCATTTGTCTTCGGAAGATTATCGCAAGACTATCAAGATTTTGGAACATGCTATCTTGTCTACAGACCTTGCACTTTATTTCCAGAAGAGGGGAAATTTTGATAAACTTGTTCATAGCGAATCAGCCGACTGGAGTCTTGAGAGCAACGGAGAGCTGTTACGAGCAATGATGATGACAGCCTGTGATGTGGCAGCCATTACTAAACCATGGGAAATACAACAGCAGGTTGCTGAACTGGTAGCAAGTGAGTTTTTTGAGCAAGGTGACATTGAAAGATTTCAACTCAACTCTGAACCAATTCCCATGATGGATCGCAAGAAGAAAGATGAGTTACCCAAGATGCAAGTTGGCTTTATTGACTTTATCTGTTTGCCAGTGTACACTATGTTTTATGATTTGGAGCCTTGCTTGAAACCATTTTACGATGGATGCGTGGAAAACAGGAGAAACTGGCAGGCACTGGCGGACAGGAGAAGCAGTGAAGGTTAG

Transcript

BRAKERYMET00000012516

Protein

Uniprot

Uniprot term	Description
B3LVW5	cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila ananassae OX=7217 GN=Pde6 PE=3 SV=1
B4LVU6	cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila virilis OX=7244 GN=Pde6 PE=3 SV=1
B4JXX2	cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila grimshawi OX=7222 GN=Pde6 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01590	GAF	GAF domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00233	PDEase_I	3'5'-cyclic nucleotide phosphodiesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029016	Homologous_superfamily	GAF-like domain superfamily	Interproscan
IPR003018	Domain	GAF domain	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR023088	Family	3'5'-cyclic nucleotide phosphodiesterase	Interproscan
IPR036971	Homologous_superfamily	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamily	Interproscan
IPR003607	Domain	HD/PDEase domain	Interproscan
IPR023174	Conserved_site	3'5'-cyclic nucleotide phosphodiesterase, conserved site	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR002073	Domain	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11347	CYCLIC NUCLEOTIDE PHOSPHODIESTERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004114	Molecular Function	3',5'-cyclic-nucleotide phosphodiesterase activity	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13298	PDE11; dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11	EC:3.1.4.17 EC:3.1.4.35	Cushing syndrome	ko04934	deepkoala