Gene detail

Detailed information of BRAKERYMEP00000012807.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3164644.1, unnamed protein product [Porites lobata]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91YR1	Twinfilin-1 OS=Mus musculus OX=10090 GN=Twf1 PE=1 SV=2
Q5RJR2	Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1
Q56JV6	Twinfilin-1 OS=Bos taurus OX=9913 GN=TWF1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005134 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00241 all species →	Cofilin_ADF	Cofilin/tropomyosin-type actin-binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028458 all species →	Family	Twinfilin	Interproscan
IPR029006 all species →	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR002108 all species →	Domain	Actin-depolymerising factor homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13759 all species →	TWINFILIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0003785 all species →	Molecular Function	actin monomer binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0010591 all species →	Biological Process	regulation of lamellipodium assembly	Interproscan
GO:0010976 all species →	Biological Process	positive regulation of neuron projection development	Interproscan
GO:0030016 all species →	Cellular Component	myofibril	Interproscan
GO:0030042 all species →	Biological Process	actin filament depolymerization	Interproscan
GO:0030837 all species →	Biological Process	negative regulation of actin filament polymerization	Interproscan
GO:0042989 all species →	Biological Process	sequestering of actin monomers	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0051016 all species →	Biological Process	barbed-end actin filament capping	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08870	TWF; twinfilin	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.