Gene detail

Detailed information of BRAKERYMEP00000013430.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029179486.2, uncharacterized protein LOC114946990 isoform X1 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000013430

ATGGCCTTAGTTTATAATCTACTGTTTACCACTTGTGTTATCGCCGCTGTTCGATCAACTACTGGTTGTCCATCTTGGTGTAACTGCACATCAAGCGCCTTGAGTGTATCTGTTAACTGCAAAGACGGAAGTCTCACATCAGTACCTATCGATTTGCCCAAGAACACATCGTTTGTTGACTTGACGGGGAACCCTGTAAAATGCGACTGCGAATTTTATCGTTCTTGGAAAATACTTAAAGGGAAAGGAGTTGAGATAAGAGGCAGATGCTCTGACTCATCCTCTAAACTAAGCGGCGCTTCCTTTCAAGATCTCAAAGAGGAATCTTTTGCTTGTGATGGATCATCCGTATTGCTCGGCACAAACATACAGCCCTCCACAGCCGCTGCTGCCAATGTACTCACCAGCCCACCAGTGCGGGCCTCAGAGAAGATTCCAGCAGTAACTCCAGAACATGGTGGTGATAAATCCATCGAGTCTTCTCAACCTGTTGATGTGATAGCATTATCTCAAAACATCCATGCGGTGGCGTCACCTCAGGCCGTCCCTGTGGTGATGACGACTCGCCAAATCGCCCCCGTGGTGACGCAATCTTATGCCATGTCTGTGGAAACGTCATCTCTAGCCGTCAATGTGGGGACATCACATAAAGAAGCATTTGTGGCGATGTCATCGAAAGCTGTCCCAGAAGTTCccacgatgacgtcatctcGAGCTAGTGCTGTGGGCAAGTCATCTCAAGCCCTTCCTGTGATTCCAGGCCAACAAAGATCCGTTGTAACCTCTGTAGCGGAACTAACGTCGTCTACAGGCGTACATTCTCGATCGGCACTATTACCCTCAAGCTCAGCAGCAAAACTTGAAATGgttacaacaacaagaactcCGAGAATGTTTCATGTTTCTACGACTGTTGCCCTCGAGTTTCCCCCTTCGTCCAGCGTCCGAGAGGATGGCAGTTCCTCCGTCGCAGGTGCTCCGCCATTAGGCTCAGCTAGTGTCCAAGTGAACGTCACGAGTTCAGCTGACGTCTCACCGGGCCAGCAAAGATCCGTTGTAACCTCTTTAGCGGAAGTAACGTCGTCTACAGGCGTACATGCTCGATCAGCACTATTACCCTCAAGTTCAGCAGCAAAACTTGAAATGgttacaacaacaagaactcCGAGAATGTTTCATGTTTCTACGACTGTTGCCCTCGAGTTTCCCCCTTCGTCCAGCGTCCGAGAGGATGGCAGTTCCTCCGTCGCAGGTGCTCCGCCATTAGGCTCAGCTAGTGTCCAAGTGAACGTCACGAGTTCAGCTGACGTCTCACCGGCAGAAGTGAGTGGTGTCTCCAGTAGCACAGCTGCTCCACCCACAATGCCACCGGAAACACCCGTTATCACAACGTTGGAGGCTCCGAGCGAGCCAGTTGGCCTTTATACAATGGTACAAGTCAAGTGCGTTTCAACAGGCAACCCAAAGCCTAACGTTCGTGTAACATTTAATGGTCAACCCGCGGAAAAGGCGGATGGTGTGAATGTGAGATCTGGTGACTCAGGAAAAGAGATAGAATTTAAGGCTGTAAGAAATTCAGAAGTCTCCTGTGAAGCAAGCAGTGAGCTTGGAAGGGATAAACGCAAAATCAAGATCTCTGTAGATCAAACCGGCGCCGAGTATTTGATGCTTAGGGTGGAGCTGACACAAGAACAATTTAATGAGAACATGAAAAACAAGGATTCCAAAGAATTCCAGGACATTGCTGAAAAGGTCACGTCGCAGGTGCGGTCCCTCGTGAGCCAGTATGATAGTTTTGTTGACGTCAGCCTTGTCGAACTGCGGAAAGGTTCAGTGATAGCGTATATTTTAGTCAAGACGTTTCAGGACTCTGATGATTCAGTAGAAAAAACCCTGAAAGCAGAGATCGAGAAAGCCAAGCTGGGCAGCATACCAGTGGATCGCTATAAGTACTCCTTTGAAAGAACCGAAGCTTGTCCATCTGAGTTCTTAAACGTCACGTGGAATGATGCTGCTCATGGAGAAACCGATGTGGTTCCATGTCCCAGAGGAATTCAAGGTTTTGCTAAACGGAACTGTACGTTGGGGAAATGGTACTACCCTGACTACACAGACTGTAAAAGTGAGGAGTTTGTCAGCCTAGGAAGTCAGATGAAACAGTCCACCTCTTTGGGAACTTTAGCGAAAACAGCGGGTGCATTTTTAACAGGTTTAGAAAACCTGTTGAACCTGACAACCCCGAACGAGGACTATGCAATAATGGCTGGCGATCTTGCCTCAAGCACAGAAATACTGCAAATAGTGGTTGATTACATAACACAGCAGAAAGACGACCATGCTCATGACGAAAGCGAAGTTAAGCTCGTGGTGGAAGTGGCTAGCAACGTTCTTCATCGGAACAACGAGCAGGAGTTTATCGTTGCACAGAAGTTGAAACAGACGGCATCTAAATTCATCTTGCTTCTAGAAGAATATGGACGACAGGCTGCTCGAGTTATGCCTCCCAAAGTCAACAGAGATCTAGCCATAATCAAAACTGAGAACGTTGTTATGGGTGCTGGCGTAGCCGATCCAAAGACCGTATCGGAAGACATCACTTTTCCAAACTACGCTTGGTCCGAGTTAGCGGACGTGCAAAAGAAGTGGAATACCTCAACGTTTGTGGTGCTAAAACAGGACATGATTAAATCCATGGATGATGATAATAATGGAATCCGAATTTCTGGCTTTTTGTACAGAACACTCACAAGGATTCTTTCATTTGAAAGtGCTTACAGTGACAAGGGACACGCTTTTGAGATCAACTCAGCTGTGATTTCCGCGTCCATGAATCCTAAACCATCCAGTAAACTGGCTCAACCTGTTGTAATCGCGTCCAAAAATCTTCAGGAAGTTAATcTCGAGGATGACGAGGAACCAATCTGTGCATTTTGGGATTTTAACATGAACGCGCCCCATGGGGGGTGGTCTAAGGAGGGTTGTAACGTATCCTCGTACAATCGTATCCAGACTACATGTCAGTGTGATCACATGACCAATTTCGCAGTCTTACGAAGCAAACCCCTTCCTCCCGTCAAACAAGTGtCGACACAAGGAATACGTGATTTCATCCACTGTGTTTACATCGCATCTTGGATAATCATTGCTTTTGCTGTCCTTACTTTCTTGATTCTCTTGATTCTCTGCCCATGGTTGGAACCTGATCGTACATGGGCGATGCATATGTGTGTTTGTGCTTCCGTCATCGTCACCTTCGTCTTAATTCTCCTGGGCTTGGCCTCTTATAACAACTTGAACCTTTGCCATATCTACTCGTTCCTCGTTCATTACTTCTTCCTTTGCGCATTTTCGTGGATTTTGACTGAGGGCGTTTACATGAGAACGTGGATCACAGAAAAAGGACCTCGAAAGAGATACTGGATTATCTACTTTCTGTTAGGATGGGGTTTACCTGGGATTGCGATGTTTATAACGTGGCTGATAAATAAACTCGTCGACTTTGAAAGCTTCATGTCGTGCTGGCTGTCGATATCCAATCCTTTGGTTTGGGTCTTCTTTGTTCCTGCGGTAGTTTTCTTCTTTGTTAGCTGCTTTAATTTCATCATAATATGGAGAGCAATCACTGGACTACCAAGACAAGGGCTGAAAAATTATTATCGCAACACACGATTTAGGGTTCGCATTCGATATTCTCTCATTCTGATGCTTATGTTTATCATCACATGGCTGATGGGAATTCTTCTCATCACATATTACTGGAAGGCGTTGCTGTGCATTCTCTTCATCATATGCTGCACAATCACGgGATTCatgcttttgttattttatgttaTAATGGACCGGCAGGTCCAAGATGCTTTCAAGTACTGCTGTTGCTGTTGGAGAAAAGGTCGCAGAGGAAGCTATTGGGTTAGAGGACAAGGCGGTGACGTGTTTAAAGCAAGTCCCCAAGAAGATTTAGAGcGTCGGGAGCAAGAGCGGCAACAAGAGCGCCAGAGATTGGTATCAGAAGGCACGGAACAAACAGAACAAGACCAAGATATTGAACTCAATGGCGTGGATAAAACACACGAATACGAAGATCCTCTGATACCACAGGATAAAGGCCCTAGGCTGGAGCCGTCTCGGCCATTTGAATCTTCTACAGAGAGCTTTGATCCCCTATATGAGCGGGTGAGACATTCTGCTGCTGTGGAAGTCCCACCAAGCCCCTCTCCCTCGATGGAAGAACCCAAACCAGAGCCAGTATACTCAAAGGTTATCAAGCCAAAACGTCCGAGGCATCCTGAATCAGACagcgacgatgacgatgaactGTTGACTCCGGAGGAAAGAGAGGCTCGTTGGATGCGGGGACTAACGCGTGAGCAAGTCATACGGATGGCTAAGAAATCCGATGCGTCTAAGACGGTCCTGAAACGGTACGAGAGCCCTAGTGGCAGCAAGGAAAAGTTAGGAGGACCGGTTTATTTGATGAACCAGCAGGAGTTAGACGAAGAACTGAAGCAGTTTAGGAAGTTTTTCGATCACGGCAAAACACCTGAGTCATCATCAACATCCAAACCTACAACAAGTACACCGAGAACAGATGAAATCTCCGATTCACCAAGTGGCACTTTCAAGAGAGACGAAAGCACGTCGAGTTCAGTTGCAAAACCAGCAAGCAAACCGAGTGTCAGCTGGGAAGAAGATTCTGCAGCTAAGAAGGCTGGATCAACTGGAAGGCCAAACCAAACCGGAATTGATGCTTCTTTGCAGGAACTGGATCGGAGGCATCGTGATGAAAGGGATGACCCTACTGACAAACGAACCGATGTGGTAAGTATATAA

Transcript

BRAKERYMET00000013430

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
G5EDW2	Latrophilin-like protein 1 OS=Caenorhabditis elegans OX=6239 GN=lat-1 PE=1 SV=1
Q9QYP2	Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus norvegicus OX=10116 GN=Celsr2 PE=1 SV=1
Q9R0M0	Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus OX=10090 GN=Celsr2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006505 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01390 all species →	SEA	SEA domain	Family	Interproscan
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF01825 all species →	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF02793 all species →	HRM	Hormone receptor domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR001879 all species →	Domain	GPCR, family 2, extracellular hormone receptor domain	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR000372 all species →	Domain	Leucine-rich repeat N-terminal domain	Interproscan
IPR036445 all species →	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011 all species →	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000013430.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.