Gene detail

Detailed information of BRAKERYMEP00000013663.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029195611.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114961175 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000013663

ATGGAGGATGCTCGTCAAAAACAAGAGGCTCGTTTTGCAAGGAACCTTGCTCTTGAAAAACAACGGGAGGAAATTCTCCTTGAGAGAGCAAGGCTACTTTCGTTAAAGAATGAGTTAGGCTTTAATGACGGTAGAGAGACGAAAACTTCCCAAACTTCGTCGTCATCTTCACAACTGAGCGCGGCAATTCGAAGGACGACCAAAAAAATACCTGAATTTGAAAGTCATCTCCAAACACTACGAGAAAAGGACCAAGCACGGCTAAATTTGTTGAGAAAACCTTACAACGGCGAAATGGGCATAGGATCATACGAACCTTGGCAACTTGAAGACGTGTACTTCGTTCGCGAATTCGTGGCGACCTGGATTGATGAGGTTTTGGATTTTATCGTACGAGATCGTGCGAGAAGTGGTACACAACGCGAGGTCCCACATATTGCAGAAAGAGTTTTTGAGGAGCTGGAAGCTGATAGGAGAAATGGTGAActttttcagttgagtttagACATCGGACGAAGTATTCTGACAGAGGTTATTCACGAGAATGCTAGAGAAACAGCTGATGAAATAATGGAGTTTGAAATGCAAACCAAGGAAATGTTGAATGATATAATGCTAGATTCATTTGGTATACAGTTGCAATCACAAGCCCAGAATAGAGGTGCCTTGCTTAGCAATGCTCTGTTACAAATCAAGAAAGAGGCACAGAGAAAAGGGAATGCATGGGCCCATAGCCAAAGCTTTCTTGCCAAAGATACCTCACAAGGCTCAGTGGCATTAGAAGTGGAAGAAACAGATTCTTTTGATGGCACAGTTTTGTACTTTCATGACATCACACCTTACGATGACATTCCTGATGCAAGTCTGTCAGTAGAGCAAGTAGATTTCCAAAACAAGGAATCTGAATTCTGGATGCGTAATACTACTGACCTCTCTGTTCTTCCATTACCAAGACGATGCAAAGGTATTTCATGCAGTGCAATATCGTCAGATCACTCCCTCATTGCATTAGGCACGGTTCAAGGTGACATTCTGATATGGGATTTATTGCCCTATCCTCCACGCATATTGAGAACAAGCCGTGGGAAAAATACAGTTATCACGCAACTTCGGTGGGCCCTAGACTCTTCCCAGGTGTTAAGTGTTGATAATCATGGAACTGTTAAGATTTGGTCGCTAGGCGACACTAAATCTGTTCCTTATGATGTCAAGTCatttgaacctgttgaagagaATCTTGGTTTCAACCCCACAGCTTTGCTTCCTTTGGTAACACTTCAGCAAAATGACTTCTTGTTCACTGAAGGTCCTCTCTCCAACTCCAAAGATTCAACAAGTAAAGCAACAGCTGTCGCCTTCCATCCTTCTGTTTCACTTTTTGGGAAACAAAGCTATTTGATGGTGGGCTTAAACAATGGTAATATTATTAGAATCAAGTACAGGGCTGTGCCATCCATCATGTCCATCCCACAGGTCAAACCAACCAATGGGACACCTCACAAGATTGCTCAAGATATGGAAGCTGAACTTTTCAAATCACACCAGAACTGCATTATACTGATAGGCTTTATAAACAATGTTTCTCCTATGGTAACAGTGGACGATAAGGGATTTATCAACTTGTGGGAATATTCCAGTGAGTCATTATCAGGATTTGGCTGGTTTGTTCCAAGCATCAAATACAGGTTGAAGATGTCAGAATTGACATATGAGCCAGTTGTGGGGGCACAGGAAAAAGTTGAGTTTACTGATGTTGCAAGAGGGCCAGACAGAAAACAACTCCGTGCCAGGCAAAAGGTGATTCAAAAGCGAGAAAGAGTTCAAAAGTACATCAGCTCCCTTCAACTAGGGCAATCATGGAAGACAGAAGAGAGAGATGAAGAGGTCACCCATATATACGCGCCAAAGAGTGTCCCCGAATCTGGAGCACATTTTCACTGTGTAACGCATCACAACTCATCAGGCTTGCTGGCATCTTATGTCACAAAGCTTTACAGGCCGATTGAAGTACCATGTTCCCGATTTGTCTCCTGCCAGGTGAACTCCTCAGgatcaaagcttgtgtttatgTTATTGTTTCCTGAAGCTGACCCAAAAGGAGCTCATGCTTCATTTGTTACTGTGAACCTCAAGCCTGCAGTGGCAGTCAGTAAGAATTATGTAAATATCTCCCTCAACAAGAATGATTATGTGAAGTGCCAGCGTGATGGTAGTTGCTCTTTTGGACTTTCCCGGGCAATAGATGCAACTGGGAGTGAATATATTGTGGCAAATTTAAGCGGAAATGTAACCGCCATTTCCATGACAACAGGAAATGATGTCATGGGCAAAATGGAGCCAGGTTGGATTGGGTGCCAGCTGAATATAACGAAAGGCTTGATCCCACCAGCATCAAAGATTCAAGTAGCTAGCATGTTTAATGGCCTACAGGTTTTGTTCTATGCACAACAATACAATTCTACCATCTTGTTGCAACTTACAGACAGGAATACCAAAGAGCAGCGGTTGAGAACACGGAGGGCTTTCCAGAAATGGGTTCGATGCAGGTCAGATCAAGATGGTGAGAAAATCCCACCTGCACTACAGACAGTGAGGCGTGTTTGTTGGACTTTTGATGGGCATACAGATGTCTACGTCGAATGTTTCGTGGAGTCTCTGGTTTTGGAACTGATTGATGATGCAATTCAGACCGTTGATGGTCCATTAAGCAAGGACCAAAGACAGGCTTTTCATGCTGAAAATATTGAGAGACCATTTTTGCGGAAGACATCTCAGATTTCTAAAGAAAATGAACCTGGAAGTCTTTCTCAGCTTTCTGAAAAATAA

Transcript

BRAKERYMET00000013663

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010740 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species

Pfam domain

No Pfam domain signature was detected for BRAKERYMEP00000013663.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR050687 all species →	Family	Dynein Intermediate Chain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12442 all species →	DYNEIN INTERMEDIATE CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005868 all species →	Cellular Component	cytoplasmic dynein complex	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0042073 all species →	Biological Process	intraciliary transport	Interproscan
GO:0045503 all species →	Molecular Function	dynein light chain binding	Interproscan
GO:0045504 all species →	Molecular Function	dynein heavy chain binding	Interproscan
GO:0097014 all species →	Cellular Component	ciliary plasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000013663.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.